RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 TXNDC16Q9P2K2 825 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 PILRAQ9UKJ1 303 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 PABPN1LA6NDY0 278 aaKnown RBP14.04□□□□□ -0.16
USP39-206ENST00000448971 TMEM150CB9EJG8 249 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 EIF3FO00303 357 aaPredicted RBP14.04□□□□□ -0.16
USP39-206ENST00000448971 NKX2-8O15522 239 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 SPAG6O75602 509 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 DLGAP3O95886 979 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 ZNF28P17035 718 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 SAT1P21673 171 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 CCR10P46092 362 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 CDKN2DP55273 166 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 TRADDQ15628 312 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 SLC5A12Q1EHB4 618 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 DEFB110Q30KQ9 67 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 SLC26A11Q86WA9 606 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 MMGT1Q8N4V1 131 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 ESX1Q8N693 406 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 CEP112Q8N8E3 955 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 NOA1Q8NC60 698 aaKnown RBP14.04□□□□□ -0.16
USP39-206ENST00000448971 KIAA1143Q96AT1 154 aaPredicted RBP14.04□□□□□ -0.16
USP39-206ENST00000448971 LINGO1Q96FE5 620 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 SLC45A3Q96JT2 553 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 IRAK4Q9NWZ3 460 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 MOCS1Q9NZB8 636 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 TMEM184BQ9Y519 407 aaPredicted RBP14.04□□□□□ -0.16
USP39-206ENST00000448971 PSAT1Q9Y617 370 aa14.04□□□□□ -0.16
USP39-206ENST00000448971 SPENQ96T58 3664 aaKnown RBP14.04□□□□□ -0.16
USP39-206ENST00000448971 FAM95CA0A1B0GW59 222 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 TCRBV9S1A1TA0A576 114 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 MYO1CO00159 1063 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 ZBTB14O43829 449 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 CPNE3O75131 537 aaKnown RBP14.03□□□□□ -0.16
USP39-206ENST00000448971 SCRG1O75711 98 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 TIAF1O95411 115 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 MAGP20916 626 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 FDXRP22570 491 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 PSMB5P28074 263 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 OAS2P29728 719 aaKnown RBP14.03□□□□□ -0.16
USP39-206ENST00000448971 SKIV2L2P42285 1042 aaKnown RBP14.03□□□□□ -0.16
USP39-206ENST00000448971 SF1Q15637 639 aaKnown RBP14.03□□□□□ -0.16
USP39-206ENST00000448971 PWWP2BQ6NUJ5 590 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 CDHR3Q6ZTQ4 885 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 UBE2R2Q712K3 238 aaPredicted RBP14.03□□□□□ -0.16
USP39-206ENST00000448971 BPHLQ86WA6 291 aaPredicted RBP14.03□□□□□ -0.16
USP39-206ENST00000448971 CTAGE3PQ8IX95 158 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 FAM20CQ8IXL6 584 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 GALNT6Q8NCL4 622 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 OR9A1PQ8NGU1 263 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 OR8K5Q8NH50 307 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 FLVCR1-AS1Q8TAF5 88 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 DENND1AQ8TEH3 1009 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 ZNF501Q96CX3 271 aaPredicted RBP14.03□□□□□ -0.16
USP39-206ENST00000448971 CATSPER2Q96P56 530 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 SLC7A5P2Q9GIP4 190 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 SYTL2Q9HCH5 934 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 INTS7Q9NVH2 962 aaKnown RBP14.03□□□□□ -0.16
USP39-206ENST00000448971 MTRF1LQ9UGC7 380 aaKnown RBP14.03□□□□□ -0.16
USP39-206ENST00000448971 ANAPC2Q9UJX6 822 aa14.03□□□□□ -0.16
USP39-206ENST00000448971 ZNF839A8K0R7 811 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 ZNF891A8MT65 544 aaPredicted RBP14.02□□□□□ -0.17
USP39-206ENST00000448971 PIAS1O75925 651 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 MT-ND3P03897 115 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 NTRK1P04629 796 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 GSTA2P09210 222 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 GP1BBP13224 206 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 CYP2A7P20853 494 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 STX2P32856 288 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 MAGEA4P43358 317 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 CBLBQ13191 982 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 SP140Q13342 867 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 MAP7Q14244 749 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 PAQR3Q6TCH7 311 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 C6orf15Q6UXA7 325 aaPredicted RBP14.02□□□□□ -0.17
USP39-206ENST00000448971 TIPARPQ7Z3E1 657 aaKnown RBP14.02□□□□□ -0.17
USP39-206ENST00000448971 ZC3HC1Q86WB0 502 aaKnown RBP14.02□□□□□ -0.17
USP39-206ENST00000448971 SYTL1Q8IYJ3 562 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 GPR135Q8IZ08 494 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 EEF1AKMT1Q8WVE0 214 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 TCTN2Q96GX1 697 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 VPS39Q96JC1 886 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 PKP4Q99569 1192 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 OLFM1Q99784 485 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 MIPEPQ99797 713 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 RHOJQ9H4E5 214 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 GPN2Q9H9Y4 310 aaPredicted RBP14.02□□□□□ -0.17
USP39-206ENST00000448971 SMYD2Q9NRG4 433 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 ABCF3Q9NUQ8 709 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 KLHL20Q9Y2M5 609 aa14.02□□□□□ -0.17
USP39-206ENST00000448971 LOC101059948A0A1B0GTJ6 334 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 E7EQ34 232 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 C8GP07360 202 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 RPA3P35244 121 aaPredicted RBP14.01□□□□□ -0.17
USP39-206ENST00000448971 PNLIPRP1P54315 467 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 SLC12A2P55011 1212 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 ITGA1P56199 1179 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 IL2P60568 153 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 ABHD18Q0P651 414 aa14.01□□□□□ -0.17
USP39-206ENST00000448971 FASTKQ14296 549 aaKnown RBP14.01□□□□□ -0.17
USP39-206ENST00000448971 ZIC1Q15915 447 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms