RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 SPRY4Q9C004 299 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 TWSG1Q9GZX9 223 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 AKIRIN1Q9H9L7 192 aaPredicted RBP12.87□□□□□ -0.35
SNHG4-201ENST00000448190 ARL15Q9NXU5 204 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 STOX2Q9P2F5 926 aaPredicted RBP12.87□□□□□ -0.35
SNHG4-201ENST00000448190 CTNNAL1Q9UBT7 734 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 TAC3Q9UHF0 121 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 BTRCQ9Y297 605 aa12.87□□□□□ -0.35
SNHG4-201ENST00000448190 ZFC3H1O60293 1989 aaKnown RBP12.87□□□□□ -0.35
SNHG4-201ENST00000448190 A0A087WUV0 522 aaPredicted RBP12.86□□□□□ -0.35
SNHG4-201ENST00000448190 STMND1H3BQB6 276 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 RIPK2O43353 540 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 RAD1O60671 282 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 HSD17B2P37059 387 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 MSH2P43246 934 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 NAB1Q13506 487 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 CSHL1Q14406 222 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 TSNQ15631 228 aaKnown RBP12.86□□□□□ -0.35
SNHG4-201ENST00000448190 ZXDCQ2QGD7 858 aaPredicted RBP12.86□□□□□ -0.35
SNHG4-201ENST00000448190 C18orf21Q32NC0 220 aaPredicted RBP12.86□□□□□ -0.35
SNHG4-201ENST00000448190 AGTRAPQ6RW13 159 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 MCATQ8IVS2 390 aaKnown RBP12.86□□□□□ -0.35
SNHG4-201ENST00000448190 LRRC56Q8IYG6 542 aaPredicted RBP12.86□□□□□ -0.35
SNHG4-201ENST00000448190 CACNA2D3Q8IZS8 1091 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 CARFQ8N187 725 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 DNAJC22Q8N4W6 341 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 OR2L3Q8NG85 312 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 NKD1Q969G9 470 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 PYCR2Q96C36 320 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 FCRL4Q96PJ5 515 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 TEFMQ96QE5 360 aaKnown RBP12.86□□□□□ -0.35
SNHG4-201ENST00000448190 ZPBPQ9BS86 351 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 DPH7Q9BTV6 452 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 TRIM54Q9BYV2 358 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 CPNE5Q9HCH3 593 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 STARD5Q9NSY2 213 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 IRAK4Q9NWZ3 460 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 SERTAD3Q9UJW9 196 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 PILRAQ9UKJ1 303 aa12.86□□□□□ -0.35
SNHG4-201ENST00000448190 EPG5Q9HCE0 2579 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 KIF26BQ2KJY2 2108 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 A0A087WV48 116 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 PABPN1LA6NDY0 278 aaKnown RBP12.85□□□□□ -0.35
SNHG4-201ENST00000448190 NCF1BA6NI72 391 aaPredicted RBP12.85□□□□□ -0.35
SNHG4-201ENST00000448190 NCF1CA8MVU1 366 aaPredicted RBP12.85□□□□□ -0.35
SNHG4-201ENST00000448190 EFSO43281 561 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 SCRG1O75711 98 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 WISP3O95389 354 aaPredicted RBP12.85□□□□□ -0.35
SNHG4-201ENST00000448190 INHBAP08476 426 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 ERGP11308 486 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 NCF1P14598 390 aaPredicted RBP12.85□□□□□ -0.35
SNHG4-201ENST00000448190 CMPK1P30085 196 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 KCNC1P48547 511 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 VSNL1P62760 191 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 TLE3Q04726 772 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 DLG1Q12959 904 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 SP140Q13342 867 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 SLC29A2Q14542 456 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 ARHGAP19Q14CB8 494 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 OR4D1Q15615 310 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.85□□□□□ -0.351e-53■■■■□ 19.5
SNHG4-201ENST00000448190 FBXO42Q6P3S6 717 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 FAM199XQ6PEV8 388 aaPredicted RBP12.85□□□□□ -0.35
SNHG4-201ENST00000448190 SBSNQ6UWP8 590 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 C6orf15Q6UXA7 325 aaPredicted RBP12.85□□□□□ -0.35
SNHG4-201ENST00000448190 TRMT10CQ7L0Y3 403 aaKnown RBP12.85□□□□□ -0.35
SNHG4-201ENST00000448190 DTX1Q86Y01 620 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 TMEM126BQ8IUX1 230 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 PLD3Q8IV08 490 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 IL22RA1Q8N6P7 574 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 SLC38A9Q8NBW4 561 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 SLC44A1Q8WWI5 657 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 PAFAH2Q99487 392 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 FUT8Q9BYC5 575 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 TXLNGYQ9BZA5 131 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 DPH1Q9BZG8 443 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 B3GNT4Q9C0J1 378 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 POPDC3Q9HBV1 291 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 SLC6A20Q9NP91 592 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 MRPS30Q9NP92 439 aaKnown RBP12.85□□□□□ -0.35
SNHG4-201ENST00000448190 SH2B3Q9UQQ2 575 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 IKBKGQ9Y6K9 419 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 APC2O95996 2303 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 ZFHX4Q86UP3 3567 aa12.85□□□□□ -0.35
SNHG4-201ENST00000448190 A0A0J9YVX5 310 aa12.84□□□□□ -0.35
SNHG4-201ENST00000448190 ZNF839A8K0R7 811 aa12.84□□□□□ -0.35
SNHG4-201ENST00000448190 H7BY64 318 aa12.84□□□□□ -0.35
SNHG4-201ENST00000448190 ZNF749O43361 778 aa12.84□□□□□ -0.35
SNHG4-201ENST00000448190 CTSVO60911 334 aa12.84□□□□□ -0.35
SNHG4-201ENST00000448190 OR2B3O76000 313 aa12.84□□□□□ -0.35
SNHG4-201ENST00000448190 C2P06681 752 aa12.84□□□□□ -0.35
SNHG4-201ENST00000448190 SLC35E2BP0CK96 405 aa12.84□□□□□ -0.35
SNHG4-201ENST00000448190 LIPCP11150 499 aa12.84□□□□□ -0.35
SNHG4-201ENST00000448190 CD1DP15813 335 aa12.84□□□□□ -0.35
SNHG4-201ENST00000448190 WT1P19544 449 aaPredicted RBP12.84□□□□□ -0.35
SNHG4-201ENST00000448190 CRABP2P29373 138 aa12.84□□□□□ -0.35
SNHG4-201ENST00000448190 GABRA4P48169 554 aa12.84□□□□□ -0.35
SNHG4-201ENST00000448190 IRF9Q00978 393 aa12.84□□□□□ -0.35
SNHG4-201ENST00000448190 PRDX1Q06830 199 aaKnown RBP12.84□□□□□ -0.35
SNHG4-201ENST00000448190 NAA30Q147X3 362 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms