RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 PIKFYVEQ9Y2I7 2098 aa18.58■□□□□ 0.57
SDCBP-204ENST00000447182 TTC34A8MYJ7 566 aa18.58■□□□□ 0.56
SDCBP-204ENST00000447182 H7C4K7 107 aa18.58■□□□□ 0.56
SDCBP-204ENST00000447182 ZNF682O95780 498 aa18.58■□□□□ 0.56
SDCBP-204ENST00000447182 ANXA5P08758 320 aa18.58■□□□□ 0.56
SDCBP-204ENST00000447182 CKBP12277 381 aa18.58■□□□□ 0.56
SDCBP-204ENST00000447182 CYP4B1P13584 511 aa18.58■□□□□ 0.56
SDCBP-204ENST00000447182 PSMB9P28065 219 aa18.58■□□□□ 0.56
SDCBP-204ENST00000447182 MAPK1P28482 360 aa18.58■□□□□ 0.56
SDCBP-204ENST00000447182 HOXA9P31269 272 aa18.58■□□□□ 0.56
SDCBP-204ENST00000447182 TMED10P49755 219 aaKnown RBP18.58■□□□□ 0.56
SDCBP-204ENST00000447182 FCGRTP55899 365 aa18.58■□□□□ 0.56
SDCBP-204ENST00000447182 CD300CQ08708 224 aa18.58■□□□□ 0.56
SDCBP-204ENST00000447182 GTF2H3Q13889 308 aa18.58■□□□□ 0.56
SDCBP-204ENST00000447182 MBTPS1Q14703 1052 aa18.58■□□□□ 0.56
SDCBP-204ENST00000447182 CPSF6Q16630 551 aaKnown RBP eCLIP18.58■□□□□ 0.56
SDCBP-204ENST00000447182 RTP2Q5QGT7 225 aa18.58■□□□□ 0.56
SDCBP-204ENST00000447182 DOK6Q6PKX4 331 aa18.58■□□□□ 0.56
SDCBP-204ENST00000447182 TRAF7Q6Q0C0 670 aa18.58■□□□□ 0.56
SDCBP-204ENST00000447182 ANKRD46Q86W74 232 aa18.58■□□□□ 0.56
SDCBP-204ENST00000447182 ZNF540Q8NDQ6 660 aa18.58■□□□□ 0.56
SDCBP-204ENST00000447182 IPCEF1Q8WWN9 437 aaPredicted RBP18.58■□□□□ 0.56
SDCBP-204ENST00000447182 MTFMTQ96DP5 389 aaKnown RBP18.58■□□□□ 0.56
SDCBP-204ENST00000447182 SLIRPQ9GZT3 109 aaKnown RBP18.58■□□□□ 0.56
SDCBP-204ENST00000447182 RPS6KA6Q9UK32 745 aa18.58■□□□□ 0.56
SDCBP-204ENST00000447182 CLDN24A6NM45 220 aa18.57■□□□□ 0.56
SDCBP-204ENST00000447182 EVPLLA8MZ36 301 aa18.57■□□□□ 0.56
SDCBP-204ENST00000447182 E9PQ18 207 aa18.57■□□□□ 0.56
SDCBP-204ENST00000447182 RFXANKO14593 260 aa18.57■□□□□ 0.56
SDCBP-204ENST00000447182 CBSLP0DN79 551 aa18.57■□□□□ 0.56
SDCBP-204ENST00000447182 COL6A1P12109 1028 aa18.57■□□□□ 0.56
SDCBP-204ENST00000447182 EFNA1P20827 205 aaPredicted RBP18.57■□□□□ 0.56
SDCBP-204ENST00000447182 CBSP35520 551 aa18.57■□□□□ 0.56
SDCBP-204ENST00000447182 SLC14A1Q13336 389 aa18.57■□□□□ 0.56
SDCBP-204ENST00000447182 ARHGEF7Q14155 803 aa18.57■□□□□ 0.56
SDCBP-204ENST00000447182 ATXN7L2Q5T6C5 722 aaPredicted RBP18.57■□□□□ 0.56
SDCBP-204ENST00000447182 FUT10Q6P4F1 479 aa18.57■□□□□ 0.56
SDCBP-204ENST00000447182 TTC16Q8NEE8 873 aa18.57■□□□□ 0.56
SDCBP-204ENST00000447182 SELENOMQ8WWX9 145 aa18.57■□□□□ 0.56
SDCBP-204ENST00000447182 SLC35B4Q969S0 331 aa18.57■□□□□ 0.56
SDCBP-204ENST00000447182 CMTM7Q96FZ5 175 aa18.57■□□□□ 0.56
SDCBP-204ENST00000447182 EPS8L2Q9H6S3 715 aa18.57■□□□□ 0.56
SDCBP-204ENST00000447182 GKN1Q9NS71 199 aa18.57■□□□□ 0.56
SDCBP-204ENST00000447182 THG1LQ9NWX6 298 aaKnown RBP18.57■□□□□ 0.56
SDCBP-204ENST00000447182 TMEM161AQ9NX61 479 aa18.57■□□□□ 0.56
SDCBP-204ENST00000447182 OSGIN1Q9UJX0 560 aa18.57■□□□□ 0.56
SDCBP-204ENST00000447182 MANSC4A6NHS7 340 aaPredicted RBP18.56■□□□□ 0.56
SDCBP-204ENST00000447182 FABP3P05413 133 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 SDC1P18827 310 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 MZF1P28698 734 aaPredicted RBP18.56■□□□□ 0.56
SDCBP-204ENST00000447182 ALDH4A1P30038 563 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 TRPC1P48995 793 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 NCS1P62166 190 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 LSM3P62310 102 aaKnown RBP18.56■□□□□ 0.56
SDCBP-204ENST00000447182 ABRQ12979 859 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 MTAPQ13126 283 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 BOP1Q14137 746 aaKnown RBP18.56■□□□□ 0.56
SDCBP-204ENST00000447182 LAPTM4AQ15012 233 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 PROX2Q3B8N5 592 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 PLEKHG6Q3KR16 790 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 GPR33Q49SQ1 333 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 KIAA1614Q5VZ46 1190 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 MBOAT1Q6ZNC8 495 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 LGALS12Q96DT0 336 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 TSSK3Q96PN8 268 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 PITX2Q99697 317 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 TMEM165Q9HC07 324 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 GPRC5BQ9NZH0 403 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 SNX6Q9UNH7 406 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 FCF1Q9Y324 198 aaKnown RBP18.56■□□□□ 0.56
SDCBP-204ENST00000447182 SH3BP1Q9Y3L3 701 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 KCNE1BA0A087WTH5 132 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 FADS2O95864 444 aaKnown RBP18.56■□□□□ 0.56
SDCBP-204ENST00000447182 TACR1P25103 407 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 CST5P28325 142 aaPredicted RBP18.56■□□□□ 0.56
SDCBP-204ENST00000447182 VMACQ2NL98 169 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 PGS1Q32NB8 556 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 TMEM236Q5W0B7 351 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 ERICH5Q6P6B1 374 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 CCDC81Q6ZN84 652 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 ANKS3Q6ZW76 656 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 SNX29P2Q8IUI4 249 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 RHOXF1Q8NHV9 184 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 PDP1Q9P0J1 537 aaPredicted RBP18.56■□□□□ 0.56
SDCBP-204ENST00000447182 KLHL42Q9P2K6 505 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 AASSQ9UDR5 926 aa18.56■□□□□ 0.56
SDCBP-204ENST00000447182 FAM32AQ9Y421 112 aaKnown RBP18.56■□□□□ 0.56
SDCBP-204ENST00000447182 GLYATL1P3A0A0U1RQE8 302 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 OR2A25A4D2G3 310 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 MYO1GB0I1T2 1018 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 DPM1O60762 260 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 FAM20BO75063 409 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 B3GALT4O96024 378 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 TRBC1P01850 177 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 BPIP17213 487 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 TGFBR2P37173 567 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 PPP5CP53041 499 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 ELAVL2Q12926 359 aaKnown RBP18.55■□□□□ 0.56
SDCBP-204ENST00000447182 DGCR6Q14129 220 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 CDKN3Q16667 212 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms