RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 NDOR1Q9UHB4 597 aa19.89■□□□□ 0.77
SDC1-205ENST00000447124 PTPN13Q12923 2485 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 LOC105369274A0A096LPK9 316 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 LOC102723532A0A0G2JNH3 316 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 PGRMC1O00264 195 aaKnown RBP19.88■□□□□ 0.77
SDC1-205ENST00000447124 PFDN6O15212 129 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 FKBP9O95302 570 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 MED26O95402 600 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 PAMP19021 973 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 FOLR3P41439 243 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 ARSFP54793 590 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 FRMPD2BQ6IN97 320 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 CYHR1Q6ZMK1 362 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 COX15Q7KZN9 410 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 OVCH1Q7RTY7 1134 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 PPP1R32Q7Z5V6 425 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 OR4N4Q8N0Y3 316 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 OR9A1PQ8NGU1 263 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 GIMAP7Q8NHV1 300 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 MAGEC3Q8TD91 643 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 FBXO6Q9NRD1 293 aaPredicted RBP19.88■□□□□ 0.77
SDC1-205ENST00000447124 CUTCQ9NTM9 273 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 INTS10Q9NVR2 710 aaKnown RBP19.88■□□□□ 0.77
SDC1-205ENST00000447124 SPATA7Q9P0W8 599 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 ZNF451Q9Y4E5 1061 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 PCDHGB7Q9Y5F8 929 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 MRFAP1Q9Y605 127 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 PCM1Q15154 2024 aa19.88■□□□□ 0.77
SDC1-205ENST00000447124 FITM1A5D6W6 292 aa19.87■□□□□ 0.77
SDC1-205ENST00000447124 KIF5CO60282 957 aa19.87■□□□□ 0.77
SDC1-205ENST00000447124 PHF2O75151 1096 aa19.87■□□□□ 0.77
SDC1-205ENST00000447124 PSIP1O75475 530 aaKnown RBP19.87■□□□□ 0.77
SDC1-205ENST00000447124 CD63P08962 238 aa19.87■□□□□ 0.77
SDC1-205ENST00000447124 ERGP11308 486 aa19.87■□□□□ 0.77
SDC1-205ENST00000447124 RRADP55042 308 aa19.87■□□□□ 0.77
SDC1-205ENST00000447124 RAPSNQ13702 412 aa19.87■□□□□ 0.77
SDC1-205ENST00000447124 WASHC2DQ5SRD0 308 aa19.87■□□□□ 0.77
SDC1-205ENST00000447124 ZNF470Q6ECI4 717 aa19.87■□□□□ 0.77
SDC1-205ENST00000447124 RBMXL3Q8N7X1 1067 aaKnown RBP19.87■□□□□ 0.77
SDC1-205ENST00000447124 DLG3Q92796 817 aa19.87■□□□□ 0.77
SDC1-205ENST00000447124 NAP1L3Q99457 506 aaPredicted RBP19.87■□□□□ 0.77
SDC1-205ENST00000447124 PKP4Q99569 1192 aa19.87■□□□□ 0.77
SDC1-205ENST00000447124 SMAD5Q99717 465 aaKnown RBP19.87■□□□□ 0.77
SDC1-205ENST00000447124 SELENOSQ9BQE4 189 aa19.87■□□□□ 0.77
SDC1-205ENST00000447124 KCNF1Q9H3M0 494 aa19.87■□□□□ 0.77
SDC1-205ENST00000447124 P4HTMQ9NXG6 502 aa19.87■□□□□ 0.77
SDC1-205ENST00000447124 STOX2Q9P2F5 926 aaPredicted RBP19.87■□□□□ 0.77
SDC1-205ENST00000447124 A0A0J9YVX5 310 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 A0A1B0GX78 115 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 CTAGE9A4FU28 777 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 CLEC18AA5D8T8 446 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 TTLL8A6PVC2 850 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 MYO1CO00159 1063 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 DSCR3O14972 297 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 SRPX2O60687 465 aaPredicted RBP19.86■□□□□ 0.77
SDC1-205ENST00000447124 USP1O94782 785 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 OR1D4P47884 311 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 VSX2P58304 361 aaPredicted RBP19.86■□□□□ 0.77
SDC1-205ENST00000447124 THOC5Q13769 683 aaKnown RBP19.86■□□□□ 0.77
SDC1-205ENST00000447124 GRM7Q14831 915 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 TCTE1Q5JU00 501 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 DCAF10Q5QP82 559 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 RNASEH2BQ5TBB1 312 aaKnown RBP19.86■□□□□ 0.77
SDC1-205ENST00000447124 SUSD1Q6UWL2 747 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 CLEC18BQ6UXF7 455 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 RAB42Q8N4Z0 105 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 CLEC18CQ8NCF0 446 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 IP6K3Q96PC2 410 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 ACAT2Q9BWD1 397 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 MFRPQ9BY79 579 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 SYNPO2LQ9H987 977 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 SLC6A20Q9NP91 592 aa19.86■□□□□ 0.77
SDC1-205ENST00000447124 TRMT1Q9NXH9 659 aaKnown RBP19.86■□□□□ 0.77
SDC1-205ENST00000447124 LRRK2Q5S007 2527 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 OR2A25A4D2G3 310 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 E5RI56 91 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 SORBS2O94875 1100 aaKnown RBP19.85■□□□□ 0.77
SDC1-205ENST00000447124 HAUS5O94927 633 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 SLC1A2P43004 574 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 FNTAP49354 379 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 MPP1Q00013 466 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 CUL1Q13616 776 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 UBAP2LQ14157 1087 aaKnown RBP19.85■□□□□ 0.77
SDC1-205ENST00000447124 NKG7Q16617 165 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 YOD1Q5VVQ6 348 aaPredicted RBP19.85■□□□□ 0.77
SDC1-205ENST00000447124 METTL27Q8N6F8 245 aaPredicted RBP19.85■□□□□ 0.77
SDC1-205ENST00000447124 Q8NA96 180 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 DPH7Q9BTV6 452 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 GRPEL1Q9HAV7 217 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 C20orf96Q9NUD7 363 aaPredicted RBP19.85■□□□□ 0.77
SDC1-205ENST00000447124 GPR83Q9NYM4 423 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 KLHL42Q9P2K6 505 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 ZC3H7BQ9UGR2 993 aaKnown RBP19.85■□□□□ 0.77
SDC1-205ENST00000447124 FBXO5Q9UKT4 447 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 SNX12Q9UMY4 172 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 VPS9D1Q9Y2B5 631 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 DHRS7Q9Y394 339 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 MAD1L1Q9Y6D9 718 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 FAM169AQ9Y6X4 670 aa19.85■□□□□ 0.77
SDC1-205ENST00000447124 IGKV1-8A0A0C4DH67 115 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms