RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 IKZF3Q9UKT9 509 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 LOC400499M0QZD8 3231 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 FAM159BA6NKW6 160 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 TERTO14746 1132 aaKnown RBP14.26□□□□□ -0.13
HDAC4-204ENST00000446876 ZBTB14O43829 449 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 MSL3P1P0C860 447 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 IMPA1P29218 277 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 RPA3P35244 121 aaPredicted RBP14.26□□□□□ -0.13
HDAC4-204ENST00000446876 TAS2R39P59534 338 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 PHKG1Q16816 387 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 ATP1A1-AS1Q5TC04 95 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 LCN10Q6JVE6 187 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 SYTL1Q8IYJ3 562 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 SMPDL3AQ92484 453 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 CLIP3Q96DZ5 547 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 SLC12A9Q9BXP2 914 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 RHOJQ9H4E5 214 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 ACTR5Q9H9F9 607 aaPredicted RBP14.26□□□□□ -0.13
HDAC4-204ENST00000446876 CAB39LQ9H9S4 337 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 SYTL2Q9HCH5 934 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 IRAK4Q9NWZ3 460 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 TAC3Q9UHF0 121 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 SERTAD3Q9UJW9 196 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 PADI1Q9ULC6 663 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 PDE10AQ9Y233 779 aa14.26□□□□□ -0.13
HDAC4-204ENST00000446876 MTO1Q9Y2Z2 717 aaKnown RBP14.26□□□□□ -0.13
HDAC4-204ENST00000446876 E7ENX8 843 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 E7EQ34 232 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 H3BMH7 237 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 NKX2-8O15522 239 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 ZNF749O43361 778 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 CTSVO60911 334 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 FAM155BO75949 473 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 OR2B3O76000 313 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 MT-ND3P03897 115 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 C8GP07360 202 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 CCNYL3P0C7X3 344 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 PRKAR1AP10644 381 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 IL2P60568 153 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 TAP2Q03519 686 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 DNASE1L3Q13609 305 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 ARHGAP19Q14CB8 494 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 PTCHD3Q3KNS1 767 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 KBTBD12Q3ZCT8 623 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 LRRC8EQ6NSJ5 796 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 PCSK4Q6UW60 755 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 CEP97Q8IW35 865 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 CTAGE3PQ8IX95 158 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 LRRC56Q8IYG6 542 aaPredicted RBP14.25□□□□□ -0.13
HDAC4-204ENST00000446876 ZNF655Q8N720 491 aaPredicted RBP14.25□□□□□ -0.13
HDAC4-204ENST00000446876 ZSCAN1Q8NBB4 408 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 LRRN4CLQ8ND94 238 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 FBF1Q8TES7 1133 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 IFT81Q8WYA0 676 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 STARD8Q92502 1023 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 CDKL2Q92772 493 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 MR1Q95460 341 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 SLC45A3Q96JT2 553 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 CHRNA10Q9GZZ6 450 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 PCMTD2Q9NV79 361 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 INTS7Q9NVH2 962 aaKnown RBP14.25□□□□□ -0.13
HDAC4-204ENST00000446876 NSMCE4AQ9NXX6 385 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 EURLQ9NYK6 297 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 STOX2Q9P2F5 926 aaPredicted RBP14.25□□□□□ -0.13
HDAC4-204ENST00000446876 PLCL2Q9UPR0 1127 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 PCDHB3Q9Y5E6 796 aa14.25□□□□□ -0.13
HDAC4-204ENST00000446876 MDC1Q14676 2089 aaKnown RBP14.25□□□□□ -0.13
HDAC4-204ENST00000446876 CCDC88CQ9P219 2028 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 NPEPPSL1A6NEC2 478 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 KATNA1O75449 491 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 GSTA2P09210 222 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 ZNF37AP17032 561 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-204ENST00000446876 TCN2P20062 427 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 ECHS1P30084 290 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 CMPK1P30085 196 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 RORAP35398 523 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 RPS18P62269 152 aaKnown RBP14.24□□□□□ -0.13
HDAC4-204ENST00000446876 SP140Q13342 867 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 C1orf189Q5VU69 101 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 C16orf46Q6P387 395 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 MCATQ8IVS2 390 aaKnown RBP14.24□□□□□ -0.13
HDAC4-204ENST00000446876 GPR135Q8IZ08 494 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 DSELQ8IZU8 1212 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 PPM1NQ8N819 430 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 MCOLN3Q8TDD5 553 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 ANKRD49Q8WVL7 239 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 TTC9Q92623 222 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 UBL7Q96S82 380 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-204ENST00000446876 RBBP8Q99708 897 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 CPNE1Q99829 537 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 DPH7Q9BTV6 452 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 UNKQ9C0B0 810 aaKnown RBP14.24□□□□□ -0.13
HDAC4-204ENST00000446876 SLC7A5P2Q9GIP4 190 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 CHST8Q9H2A9 424 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 PARVBQ9HBI1 364 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 MRPS30Q9NP92 439 aaKnown RBP14.24□□□□□ -0.13
HDAC4-204ENST00000446876 STARD5Q9NSY2 213 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 NINJ2Q9NZG7 142 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 TXNDC16Q9P2K2 825 aa14.24□□□□□ -0.13
HDAC4-204ENST00000446876 IGSF10Q6WRI0 2623 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms