RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 SCRG1O75711 98 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 FAM155BO75949 473 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 CCNDBP1O95273 360 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 DLGAP3O95886 979 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 MT-ND3P03897 115 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 ENO2P09104 434 aaPredicted RBP16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 IMPA1P29218 277 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 ITGA1P56199 1179 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 AP1S2P56377 157 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 TMPRSS3P57727 454 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 TAP2Q03519 686 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 MAP7Q14244 749 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 UAP1Q16222 522 aaPredicted RBP16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 THEMIS2Q5TEJ8 643 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 KIAA1614Q5VZ46 1190 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 FIGLAQ6QHK4 219 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 SUSD1Q6UWL2 747 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 C6orf15Q6UXA7 325 aaPredicted RBP16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 PPFIBP2Q8ND30 876 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 OR2L3Q8NG85 312 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 OR2A1Q8NGT9 310 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 ANKRD7Q92527 254 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 ZUFSPQ96AP4 578 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 MRRFQ96E11 262 aaKnown RBP16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 RNF31Q96EP0 1072 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 ACAT2Q9BWD1 397 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 FAM60AQ9NP50 221 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 ABCF3Q9NUQ8 709 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 ARL15Q9NXU5 204 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 TARM1B6A8C7 271 aa16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 CPNE3O75131 537 aaKnown RBP16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 TIAF1O95411 115 aa16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 CCNYL3P0C7X3 344 aa16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 ZNF28P17035 718 aa16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 GRIA3P42263 894 aa16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 RAB10P61026 200 aa16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 PHKG1Q16816 387 aa16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 CCDC81Q6ZN84 652 aa16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 TIPARPQ7Z3E1 657 aaKnown RBP16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 VASH2Q86V25 355 aa16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 GPR135Q8IZ08 494 aa16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 GALNT6Q8NCL4 622 aa16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 OR1L3Q8NH93 324 aa16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 KIAA1143Q96AT1 154 aaPredicted RBP16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 FUT8Q9BYC5 575 aa16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 MRPS30Q9NP92 439 aaKnown RBP16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 CCDC177Q9NQR7 707 aaPredicted RBP16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 IRAK4Q9NWZ3 460 aa16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 STOX2Q9P2F5 926 aaPredicted RBP16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 CTNNAL1Q9UBT7 734 aa16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 TAC3Q9UHF0 121 aa16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 NOVA2Q9UNW9 492 aaKnown RBP16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 PLCL2Q9UPR0 1127 aa16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 IKBKGQ9Y6K9 419 aa16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 PCM1Q15154 2024 aa16.79■□□□□ 0.28
SMARCAL1-209ENST00000444508 PTPRQQ9UMZ3 2332 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 A0A087WUV0 522 aaPredicted RBP16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 TEX51A0A1B0GUA7 166 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 NPEPPSL1A6NEC2 478 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 E7EQ34 232 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 PHGDHO43175 533 aaKnown RBP16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 NTRK1P04629 796 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 ABATP80404 500 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 ZKSCAN8Q15776 578 aaPredicted RBP16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 COL28A1Q2UY09 1125 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 DEFB110Q30KQ9 67 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 ZC3H12BQ5HYM0 836 aaKnown RBP16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 UBAP2Q5T6F2 1119 aaKnown RBP16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 ICE2Q659A1 982 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 FCRL6Q6DN72 434 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 AGTRAPQ6RW13 159 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 MBOAT1Q6ZNC8 495 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 RAPH1Q70E73 1250 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 FRA10AC1Q70Z53 315 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 TRMT10CQ7L0Y3 403 aaKnown RBP16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 ADAMTSL2Q86TH1 951 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 DNAJC22Q8N4W6 341 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 ANKRD49Q8WVL7 239 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 ATL1Q8WXF7 558 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 MED8Q96G25 268 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 SLC7A5P2Q9GIP4 190 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 DERL2Q9GZP9 239 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 UTP6Q9NYH9 597 aaKnown RBP16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 SSUH2Q9Y2M2 353 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 PCDHB3Q9Y5E6 796 aa16.78■□□□□ 0.28
SMARCAL1-209ENST00000444508 ANKRD12Q6UB98 2062 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 CDC7O00311 574 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 OR2B3O76000 313 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 INHBAP08476 426 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 HBQ1P09105 142 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 CCDC166P0CW27 439 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 CCND1P24385 295 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 CRABP2P29373 138 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 GABRA4P48169 554 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 TBPL1P62380 186 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 CXADRP78310 365 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 PRDX1Q06830 199 aaKnown RBP16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 ABHD18Q0P651 414 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 SBSNQ6UWP8 590 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 TAOK1Q7L7X3 1001 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms