RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 CUEDC1Q9NWM3 386 aaPredicted RBP11.29□□□□□ -0.6
TTC28-203ENST00000442232 SYBUQ9NX95 663 aa11.29□□□□□ -0.6
TTC28-203ENST00000442232 UTP6Q9NYH9 597 aaKnown RBP11.29□□□□□ -0.6
TTC28-203ENST00000442232 FBXL4Q9UKA2 621 aa11.29□□□□□ -0.6
TTC28-203ENST00000442232 RELNP78509 3460 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 PCSK5Q92824 1860 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 ZNF839A8K0R7 811 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 PRPF4O43172 522 aaKnown RBP eCLIP11.28□□□□□ -0.6
TTC28-203ENST00000442232 SRPX2O60687 465 aaPredicted RBP11.28□□□□□ -0.6
TTC28-203ENST00000442232 CNOT3O75175 753 aaKnown RBP11.28□□□□□ -0.6
TTC28-203ENST00000442232 CCNDBP1O95273 360 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 ESR1P03372 595 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 UMODP07911 640 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 CHRM3P20309 590 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 ATP5DP30049 168 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 RPA3P35244 121 aaPredicted RBP11.28□□□□□ -0.6
TTC28-203ENST00000442232 CARSP49589 748 aaKnown RBP11.28□□□□□ -0.6
TTC28-203ENST00000442232 TERF1P54274 439 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 OCA2Q04671 838 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 TSTA3Q13630 321 aaPredicted RBP11.28□□□□□ -0.6
TTC28-203ENST00000442232 GRB7Q14451 532 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 SIX1Q15475 284 aaPredicted RBP11.28□□□□□ -0.6
TTC28-203ENST00000442232 TTLL9Q3SXZ7 439 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 AGAP7PQ5VUJ5 663 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 PRAMEF13Q5VWM6 474 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 ARMC3Q5W041 872 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 IGFL3Q6UXB1 125 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 METTL27Q8N6F8 245 aaPredicted RBP11.28□□□□□ -0.6
TTC28-203ENST00000442232 PRR7Q8TB68 274 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 COG1Q8WTW3 980 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 AGAP4Q96P64 663 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 PSMG3-AS1Q96PY0 264 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 KIFC1Q9BW19 673 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 CCDC68Q9H2F9 335 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 SOX17Q9H6I2 414 aaPredicted RBP11.28□□□□□ -0.6
TTC28-203ENST00000442232 EPS8L2Q9H6S3 715 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 SEMA3GQ9NS98 782 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 SOX13Q9UN79 622 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 NFS1Q9Y697 457 aa11.28□□□□□ -0.6
TTC28-203ENST00000442232 ICE1Q9Y2F5 2266 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 FITM1A5D6W6 292 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 TCP11X1B4DZS4 312 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 GOLGA8KD6RF30 607 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 GOLGA8TH3BQL2 631 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 PHF2O75151 1096 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 NIPSNAP2O75323 286 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 DDAH2O95865 285 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 CATP04040 527 aaKnown RBP11.27□□□□□ -0.61
TTC28-203ENST00000442232 EIF2S1P05198 315 aaKnown RBP11.27□□□□□ -0.61
TTC28-203ENST00000442232 UQCRHP07919 91 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 OGNP20774 298 aaKnown RBP11.27□□□□□ -0.61
TTC28-203ENST00000442232 FBLP22087 321 aaKnown RBP11.27□□□□□ -0.61
TTC28-203ENST00000442232 MCM3P25205 808 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 PSMB5P28074 263 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 KCNJ1P48048 391 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 VPS41P49754 854 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 MRPL49Q13405 166 aaKnown RBP11.27□□□□□ -0.61
TTC28-203ENST00000442232 THOC5Q13769 683 aaKnown RBP11.27□□□□□ -0.61
TTC28-203ENST00000442232 NKG7Q16617 165 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 TYSND1Q2T9J0 566 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 MUM1Q2TAK8 710 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 ANKRD20A4Q4UJ75 823 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 C4orf17Q53FE4 359 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 CTSL3PQ5NE16 218 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 WASHC2DQ5SRD0 308 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 KIAA0930Q6ICG6 404 aaPredicted RBP11.27□□□□□ -0.61
TTC28-203ENST00000442232 PRMT9Q6P2P2 845 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 CES3Q6UWW8 571 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 SHISA6Q6ZSJ9 500 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 OR2L3Q8NG85 312 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 HMGCLL1Q8TB92 370 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 LPGAT1Q92604 370 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 MFSD3Q96ES6 412 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 CABS1Q96KC9 395 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 WDR77Q9BQA1 342 aaPredicted RBP11.27□□□□□ -0.61
TTC28-203ENST00000442232 CRB3Q9BUF7 120 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 SLC26A1Q9H2B4 701 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 ZNF552Q9H707 407 aaPredicted RBP11.27□□□□□ -0.61
TTC28-203ENST00000442232 ZNF304Q9HCX3 659 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 SLC6A20Q9NP91 592 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 MRPS30Q9NP92 439 aaKnown RBP11.27□□□□□ -0.61
TTC28-203ENST00000442232 AGPAT4Q9NRZ5 378 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 PLEKHB1Q9UF11 243 aaPredicted RBP11.27□□□□□ -0.61
TTC28-203ENST00000442232 RUVBL2Q9Y230 463 aaKnown RBP11.27□□□□□ -0.61
TTC28-203ENST00000442232 CRYL1Q9Y2S2 319 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 COPG1Q9Y678 874 aaKnown RBP11.27□□□□□ -0.61
TTC28-203ENST00000442232 DOCK10Q96BY6 2186 aa11.27□□□□□ -0.61
TTC28-203ENST00000442232 A0A0J9YVX5 310 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 HYKKA2RU49 373 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 CTAGE9A4FU28 777 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 MAP2K7O14733 419 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 PRICKLE3O43900 615 aaPredicted RBP11.26□□□□□ -0.61
TTC28-203ENST00000442232 CTSVO60911 334 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 HSD17B2P37059 387 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 GCGRP47871 477 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 OR1D4P47884 311 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 GLRBP48167 497 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 ADARP55265 1226 aaKnown RBP11.26□□□□□ -0.61
TTC28-203ENST00000442232 SOX8P57073 446 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 FOXL2P58012 376 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms