RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 MCUQ8NE86 351 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 SUN3Q8TAQ9 357 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 GDAP1Q8TB36 358 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC2A14Q8TDB8 520 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 OVCA2Q8WZ82 227 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 RTP4Q96DX8 246 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 PIWIL1Q96J94 861 aaKnown RBP3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 TGS1Q96RS0 853 aaKnown RBP3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 CYTH2Q99418 400 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 HNRNPABQ99729 332 aaKnown RBP3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 NUDT16L1Q9BRJ7 211 aaKnown RBP3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 PAAF1Q9BRP4 392 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 MTG1Q9BT17 334 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 MED10Q9BTT4 135 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 MECRQ9BV79 373 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 DUSP16Q9BY84 665 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 BRD8Q9H0E9 1235 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 LMAN2LQ9H0V9 348 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 DPEP3Q9H4B8 488 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 NXF3Q9H4D5 531 aaKnown RBP3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 DHX35Q9H5Z1 703 aaKnown RBP3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 LRRC4Q9HBW1 653 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 MLXIPLQ9NP71 852 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 RXFP3Q9NSD7 469 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 TMEM184CQ9NVA4 438 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC38A7Q9NVC3 462 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 FGFR1OP2Q9NVK5 253 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 HAUS2Q9NVX0 235 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 TMEM45AQ9NWC5 275 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 GPATCH2LQ9NWQ4 482 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 HEY2Q9UBP5 337 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 CHMP2BQ9UQN3 213 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 ARL2BPQ9Y2Y0 163 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 NME7Q9Y5B8 376 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 HEY1Q9Y5J3 304 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 IKBKGQ9Y6K9 419 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 SBF1O95248 1867 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 CLUHO75153 1309 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 MYH9P35579 1960 aaKnown RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 LOC105369274A0A096LPK9 316 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 LOC102723532A0A0G2JNH3 316 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 IGLV5-39A0A0G2JS06 123 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 TCRBV9S1A1TA0A576 114 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 CFAP73A6NFT4 308 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 HACD1B0YJ81 288 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 KBTBD13C9JR72 458 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 TNPO2O14787 897 aaKnown RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 TM9SF1O15321 606 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 ZSCAN9O15535 394 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 KLK10O43240 276 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 HCRTO43612 131 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 TYROBPO43914 113 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 PLOD3O60568 738 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 PTP4A3O75365 173 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 ZNF189O75820 626 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 ZWINTO95229 277 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 MLYCDO95822 493 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 F9P00740 461 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 MT-ND3P03897 115 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 INHBAP08476 426 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 ALADP13716 330 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 AKR1A1P14550 325 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 TPSB2P20231 275 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 CHMP24386 653 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 HOXD9P28356 352 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 ALDH3A1P30838 453 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 HOXC8P31273 242 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 HNRNPH1P31943 449 aaKnown RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 RPL9P32969 192 aaKnown RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 GALNSP34059 522 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 RPA3P35244 121 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 HOXD12P35452 270 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 FDFT1P37268 417 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 MAGEA6P43360 314 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 LHX1P48742 406 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 POLD2P49005 469 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 CCR9P51686 369 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 TKTL1P51854 596 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 CLNS1AP54105 237 aaKnown RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 MRPS5P82675 430 aaKnown RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 MRPS6P82932 125 aaKnown RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 SARNPP82979 210 aaKnown RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 CSHL1Q14406 222 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 EFTUD2Q15029 972 aaKnown RBP eCLIP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 ACOX1Q15067 660 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 RPS6KA2Q15349 733 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 TPSAB1Q15661 275 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC1A5Q15758 541 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 CCL14Q16627 93 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 PDK4Q16654 411 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC25A52Q3SY17 297 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 DCAF6Q58WW2 860 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 FAM133BQ5BKY9 247 aaKnown RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 ANKRD20A2Q5SQ80 823 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 ANKRD20A1Q5TYW2 823 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 ANKRD20A3Q5VUR7 823 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 SNX30Q5VWJ9 437 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 CST9Q5W186 159 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 WSCD1Q658N2 575 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms