RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 ZCWPW2A0A1B0GU75 182 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 ARHGEF33A8MVX0 844 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 H3BMH7 237 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 K7EM74 188 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 MATN4O95460 622 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 ERVK-10P10266 1014 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 PIM1P11309 404 aaPredicted RBP19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 MAGEA3P43357 314 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 GNG11P61952 73 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 MPP1Q00013 466 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 PTK6Q13882 451 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 HSP90AA5PQ58FG0 334 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 RNASEH2BQ5TBB1 312 aaKnown RBP19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 FCRL6Q6DN72 434 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 MED25Q71SY5 747 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 HMGCLL1Q8TB92 370 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 KCNJ9Q92806 393 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 IP6K3Q96PC2 410 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 IARS2Q9NSE4 1012 aaKnown RBP19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 CUTCQ9NTM9 273 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 ABCF3Q9NUQ8 709 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 GALPQ9UBC7 116 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 COMMD10Q9Y6G5 202 aa19.05■□□□□ 0.64
SHROOM1-204ENST00000440118 HEATR5BQ9P2D3 2071 aa19.04■□□□□ 0.64
SHROOM1-204ENST00000440118 A0A0J9YVX5 310 aa19.04■□□□□ 0.64
SHROOM1-204ENST00000440118 A6NL46 340 aa19.04■□□□□ 0.64
SHROOM1-204ENST00000440118 TARM1B6A8C7 271 aa19.04■□□□□ 0.64
SHROOM1-204ENST00000440118 DNALI1O14645 258 aaPredicted RBP19.04■□□□□ 0.64
SHROOM1-204ENST00000440118 VPS26AO75436 327 aa19.04■□□□□ 0.64
SHROOM1-204ENST00000440118 EIF2S1P05198 315 aaKnown RBP19.04■□□□□ 0.64
SHROOM1-204ENST00000440118 ENO3P13929 434 aaPredicted RBP19.04■□□□□ 0.64
SHROOM1-204ENST00000440118 CLCN7P51798 805 aa19.04■□□□□ 0.64
SHROOM1-204ENST00000440118 VSX2P58304 361 aaPredicted RBP19.04■□□□□ 0.64
SHROOM1-204ENST00000440118 GBX1Q14549 363 aa19.04■□□□□ 0.64
SHROOM1-204ENST00000440118 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.04■□□□□ 0.64
SHROOM1-204ENST00000440118 NUP210LQ5VU65 1888 aa19.04■□□□□ 0.64
SHROOM1-204ENST00000440118 YOD1Q5VVQ6 348 aaPredicted RBP19.04■□□□□ 0.64
SHROOM1-204ENST00000440118 MRGPREQ86SM8 312 aa19.04■□□□□ 0.64
SHROOM1-204ENST00000440118 SMPDL3AQ92484 453 aa19.04■□□□□ 0.64
SHROOM1-204ENST00000440118 GPR21Q99679 349 aa19.04■□□□□ 0.64
SHROOM1-204ENST00000440118 FBXO5Q9UKT4 447 aa19.04■□□□□ 0.64
SHROOM1-204ENST00000440118 PCDHGA9Q9Y5G4 932 aaKnown RBP19.04■□□□□ 0.64
SHROOM1-204ENST00000440118 DSCR3O14972 297 aa19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 PSIP1O75475 530 aaKnown RBP19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 CCNDBP1O95273 360 aa19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 MCM3P25205 808 aa19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 HSD17B2P37059 387 aa19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 FASTKQ14296 549 aaKnown RBP19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 SSPNQ14714 243 aa19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 CRYMQ14894 314 aa19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 CYP2A13Q16696 494 aa19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 BBS9Q3SYG4 887 aa19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 THEMIS2Q5TEJ8 643 aa19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 SUSD1Q6UWL2 747 aa19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 NEK10Q6ZWH5 1172 aa19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 KLHL7Q8IXQ5 586 aa19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 METTL27Q8N6F8 245 aaPredicted RBP19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 OR2Y1Q8NGV0 311 aa19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 INPP5DQ92835 1189 aa19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 SIGLEC10Q96LC7 697 aa19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 FER1L6-AS2Q96M78 137 aa19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 RUNDC3BQ96NL0 473 aa19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 MRPS30Q9NP92 439 aaKnown RBP19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 PPANQ9NQ55 473 aaKnown RBP19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 UTP6Q9NYH9 597 aaKnown RBP19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 GPR83Q9NYM4 423 aa19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 TRMT6Q9UJA5 497 aaKnown RBP19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 ZNF451Q9Y4E5 1061 aa19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 UBR5O95071 2799 aaPredicted RBP19.03■□□□□ 0.64
SHROOM1-204ENST00000440118 MDC1Q14676 2089 aaKnown RBP19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 USP27XA6NNY8 438 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 MYO1CO00159 1063 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 KLF7O75840 302 aaPredicted RBP19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 TTC4O95801 387 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 IGHEP01854 428 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 PDGFAP04085 211 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 PNLIPRP1P54315 467 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 DHX9Q08211 1270 aaKnown RBP19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 RAPSNQ13702 412 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 ARHGAP19Q14CB8 494 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 FAM214AQ32MH5 1076 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 UGT3A1Q6NUS8 523 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 ADCK2Q7Z695 626 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 CPNE9Q8IYJ1 553 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 AGGF1Q8N302 714 aaeCLIP19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 CLEC1AQ8NC01 280 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 OR2A1Q8NGT9 310 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 GIMAP7Q8NHV1 300 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 PTERQ96BW5 349 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 PKP4Q99569 1192 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 SLC30A3Q99726 388 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 NAPGQ99747 312 aaPredicted RBP19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 NAT9Q9BTE0 207 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 DPH7Q9BTV6 452 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 KLHL42Q9P2K6 505 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 TAC3Q9UHF0 121 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 PCYOX1Q9UHG3 505 aa19.02■□□□□ 0.64
SHROOM1-204ENST00000440118 RP1L1Q8IWN7 2480 aaPredicted RBP19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 PABPN1LA6NDY0 278 aaKnown RBP19.01■□□□□ 0.63
SHROOM1-204ENST00000440118 ZBTB14O43829 449 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms