RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 DNMT3AQ9Y6K1 912 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-202ENST00000439724 COL4A2P08572 1712 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 GPR89AB7ZAQ6 455 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 PCDH8O95206 1070 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 PCCBP05166 539 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 PGRP06401 933 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 GPR89BP0CG08 455 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 SDC1P18827 310 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 GRIA3P42263 894 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 AQP4P55087 323 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 TBPL1P62380 186 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 KLC1Q07866 573 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 HTR4Q13639 388 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 INPP5AQ14642 412 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 AAK1Q2M2I8 961 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 AASDHQ4L235 1098 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-202ENST00000439724 C10orf62Q5T681 223 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-202ENST00000439724 SLCO4C1Q6ZQN7 724 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 MSANTD1Q6ZTZ1 278 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 TRMT11Q7Z4G4 463 aaKnown RBP11.41□□□□□ -0.58
SMAD3-202ENST00000439724 PDZD3Q86UT5 571 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 LRRTM4Q86VH4 590 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 LRRC56Q8IYG6 542 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-202ENST00000439724 KRTCAP2Q8N6L1 136 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 GTF2H4Q92759 462 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 N4BP2L2Q92802 583 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-202ENST00000439724 APIPQ96GX9 242 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 HHIPQ96QV1 700 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 NR1H4Q96RI1 486 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-202ENST00000439724 GABRG3Q99928 467 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 TEX101Q9BY14 249 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 TRIM8Q9BZR9 551 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 ZDHHC5Q9C0B5 715 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 CCM2LQ9NUG4 571 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-202ENST00000439724 SERGEFQ9UGK8 458 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 MAN2B2Q9Y2E5 1009 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 TMEM98Q9Y2Y6 226 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 PCDHGA11Q9Y5H2 935 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 MYO9BQ13459 2157 aa11.41□□□□□ -0.58
SMAD3-202ENST00000439724 A0A1W2PP55 124 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 KLHL33A6NCF5 533 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 ZNF839A8K0R7 811 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 ANHXE9PGG2 379 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 PRMT3O60678 531 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 GPIP06744 558 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 UQCRBP14927 111 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 NTSR1P30989 418 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 TIE1P35590 1138 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 HNRNPFP52597 415 aaKnown RBP11.4□□□□□ -0.58
SMAD3-202ENST00000439724 MRPS35P82673 323 aaKnown RBP11.4□□□□□ -0.58
SMAD3-202ENST00000439724 MAPKAPK3Q16644 382 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 PLA2G4EQ3MJ16 856 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 FAM83HQ6ZRV2 1179 aaPredicted RBP11.4□□□□□ -0.58
SMAD3-202ENST00000439724 AMZ2Q86W34 360 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 CACUL1Q86Y37 369 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 SYTL1Q8IYJ3 562 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 ICA1LQ8NDH6 482 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 NUDT8Q8WV74 236 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 CANT1Q8WVQ1 401 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 MSLNLQ96KJ4 702 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 APOLD1Q96LR9 279 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 PPM1MQ96MI6 270 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 TMEM74Q96NL1 305 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 EHD1Q9H4M9 534 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 LMCD1Q9NZU5 365 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 CIDEBQ9UHD4 219 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 EGFL7Q9UHF1 273 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 CNOT11Q9UKZ1 510 aaKnown RBP11.4□□□□□ -0.58
SMAD3-202ENST00000439724 AP3M1Q9Y2T2 418 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 PCDHB3Q9Y5E6 796 aa11.4□□□□□ -0.58
SMAD3-202ENST00000439724 PCYT1BQ9Y5K3 369 aaPredicted RBP11.4□□□□□ -0.58
SMAD3-202ENST00000439724 TRBV5-3A0A0A0MS03 114 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 TCRBV5S2A0A599 114 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 DHRS12A0PJE2 317 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 TACR1P25103 407 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 CTHP32929 405 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 TRIM23P36406 574 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 SEC13P55735 322 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 C21orf58P58505 322 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 TAP2Q03519 686 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 SELPLGQ14242 412 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 STARD3Q14849 445 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 IRF4Q15306 451 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 DPY19L1Q2PZI1 675 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 LRIF1Q5T3J3 769 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 KIAA1161Q6NSJ0 714 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 NOXRED1Q6NXP6 359 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 MED27Q6P2C8 311 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 DOK6Q6PKX4 331 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 ERMP1Q7Z2K6 904 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 PROSER1Q86XN7 944 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 SPPL2CQ8IUH8 684 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 DCUN1D3Q8IWE4 304 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 RIMKLAQ8IXN7 391 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 ADGRG5Q8IZF4 528 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 TP53I13Q8NBR0 393 aaPredicted RBP11.4□□□□□ -0.59
SMAD3-202ENST00000439724 CLHC1Q8NHS4 586 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 LRTOMTQ8WZ04 291 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 NEIL2Q969S2 332 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 RAD51AP1Q96B01 352 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms