RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 C3orf18Q9UK00 162 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 ZNF221Q9UK13 617 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 BTBD3Q9Y2F9 522 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 BRCA1P38398 1863 aaKnown RBP9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 ILVBLA1L0T0 632 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 CENPXA8MT69 81 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 CXCR6O00574 342 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 SEC14L2O76054 403 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 KCNK2O95069 426 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 SNX4O95219 450 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 MTHFD2P13995 350 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 ARPC4P59998 168 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 BCL2L1Q07817 233 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 NFE2L1Q14494 772 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 SPANXN2Q5MJ10 180 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 C6orf136Q5SQH8 315 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 LCN8Q6JVE9 175 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 PDE12Q6L8Q7 609 aaKnown RBP9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 DHRS4L2Q6PKH6 230 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 CYP20A1Q6UW02 462 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 RFLNAQ6ZTI6 216 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 GALNT12Q8IXK2 581 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 STX19Q8N4C7 294 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 C2orf73Q8N5S3 287 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 OR4F6Q8NGB9 312 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 C1orf74Q96LT6 269 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 ZDHHC6Q9H6R6 413 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 PTBP2Q9UKA9 531 aaKnown RBP9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 RGPD3A6NKT7 1758 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 RGPD4Q7Z3J3 1758 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 INHAP05111 366 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 FDXRP22570 491 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 XPAP23025 273 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 GABRR2P28476 465 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 POLD2P49005 469 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 ARHGDIAP52565 204 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 DNAJB13P59910 316 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 GPR17Q13304 367 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 DSC3Q14574 896 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 CTF1Q16619 201 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 PRSS36Q5K4E3 855 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 ZNF697Q5TEC3 545 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 SYCE2Q6PIF2 218 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 KLHL17Q6TDP4 642 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 CEP68Q76N32 757 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 TSPAN33Q86UF1 283 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 APCDD1Q8J025 514 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 C10orf111Q8N326 155 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 NETO1Q8TDF5 533 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 FUBP3Q96I24 572 aaKnown RBP eCLIP9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 MAELQ96JY0 434 aaKnown RBP9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 LRRC3Q9BY71 257 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 HMX1Q9NP08 348 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 RHCGQ9UBD6 479 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 NUFIP1Q9UHK0 495 aaKnown RBP9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 ENPP5Q9UJA9 477 aa9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 ARIH1Q9Y4X5 557 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE1-202ENST00000439374 A0A1W2PQ45 241 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 A0A1W2PQY0 241 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 OR6C75A6NL08 312 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 RGS10O43665 173 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 RAP2AP10114 183 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 CKMT1AP12532 417 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 HOXD9P28356 352 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 TTPAP49638 278 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 ERVPABLB-1P60509 514 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 DBPQ10586 325 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 LRIT3Q3SXY7 679 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 LETMD1Q6P1Q0 360 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 PAMR1Q6UXH9 720 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 ZDHHC21Q8IVQ6 265 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 LIX1Q8N485 282 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 TTC29Q8NA56 475 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 GTPBP3Q969Y2 492 aaKnown RBP9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 OTULINQ96BN8 352 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 IL4I1Q96RQ9 567 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 PKMYT1Q99640 499 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 TRMOQ9BU70 441 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 CNPPD1Q9BV87 410 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 OSBPL10Q9BXB5 764 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 ZFYVE1Q9HBF4 777 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 KRT84Q9NSB2 600 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 SLC6A13Q9NSD5 602 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 SNTG1Q9NSN8 517 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 TUBA8Q9NY65 449 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 GPR83Q9NYM4 423 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 OPTCQ9UBM4 332 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 ABCG2Q9UNQ0 655 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 EIF3FO00303 357 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 PER2O15055 1255 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 STC2O76061 302 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 EOMESO95936 686 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 SELPP16109 830 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 ITGALP20701 1170 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 RGS4P49798 205 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 ADARB1P78563 741 aaKnown RBP9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 CDK5R2Q13319 367 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 TBRG1Q3YBR2 411 aa9.68□□□□□ -0.86
CDC42SE1-202ENST00000439374 BCL7AQ4VC05 210 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms