RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 GPR68Q15743 365 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 ISCA2Q86U28 154 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 COMMD7Q86VX2 200 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 ATG16L2Q8NAA4 619 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 BCL7CQ8WUZ0 217 aaPredicted RBP15.42■□□□□ 0.06
DHFR-201ENST00000439211 GPR21Q99679 349 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 C2orf81A6NN90 581 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 H0YC42 278 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 PRMT5O14744 637 aaPredicted RBP15.42■□□□□ 0.06
DHFR-201ENST00000439211 RPL34P49207 117 aaKnown RBP15.42■□□□□ 0.06
DHFR-201ENST00000439211 UNC50Q53HI1 259 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 IL27RAQ6UWB1 636 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 NLGN4XQ8N0W4 816 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 STX19Q8N4C7 294 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 ZBTB44Q8NCP5 570 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 CDK15Q96Q40 435 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 BCL7BQ9BQE9 202 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 IFT22Q9H7X7 185 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 CMTM6Q9NX76 183 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 CIB4A0PJX0 185 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 FCER2P06734 321 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 IRF1P10914 325 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 ICAM2P13598 275 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 ZNF250P15622 560 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 MAP2K5Q13163 448 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 EFR3AQ14156 821 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 CTXN3Q4LDR2 81 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 AGMOQ6ZNB7 445 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 TMEM151AQ8N4L1 468 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 ZNF556Q9HAH1 456 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 TM9SF3Q9HD45 589 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 CCNB1IP1Q9NPC3 277 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 ACOXLQ9NUZ1 547 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 FAM8A1Q9UBU6 413 aa15.42■□□□□ 0.06
DHFR-201ENST00000439211 TRIM64BA6NI03 449 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 RPLP0P05388 317 aaKnown RBP15.41■□□□□ 0.06
DHFR-201ENST00000439211 ACVRL1P37023 503 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 PIK3CGP48736 1102 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 ZNF157P51786 506 aaPredicted RBP15.41■□□□□ 0.06
DHFR-201ENST00000439211 ALDH6A1Q02252 535 aaKnown RBP15.41■□□□□ 0.06
DHFR-201ENST00000439211 TIGD6Q17RP2 521 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 ADHFE1Q8IWW8 467 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 PGAP3Q96FM1 320 aaPredicted RBP15.41■□□□□ 0.06
DHFR-201ENST00000439211 GSTO2Q9H4Y5 243 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 EMC3Q9P0I2 261 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 DNMT3AQ9Y6K1 912 aaPredicted RBP15.41■□□□□ 0.06
DHFR-201ENST00000439211 PTPRFP10586 1907 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 SMLR1H3BR10 107 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 GJB3O75712 270 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 SLC22A3O75751 556 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 SLITRK5O94991 958 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 ANXA6P08133 673 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 B2MP61769 119 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 MON1AQ86VX9 555 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 CLHC1Q8NHS4 586 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 ASB2Q96Q27 587 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 SPATA9Q9BWV2 254 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 ITPAQ9BY32 194 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 KCNN2Q9H2S1 579 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 LATS2Q9NRM7 1088 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 FAM240BA0A1B0GVZ2 78 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 F5H5T6 163 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 SHOXO15266 292 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 ITGB1P05556 798 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 CAPN3P20807 821 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 GADD45AP24522 165 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 PGFP49763 221 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 PYDC2Q56P42 97 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 TXNDC11Q6PKC3 985 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 RASSF6Q6ZTQ3 369 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 LUZP2Q86TE4 346 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 RETREG3Q86VR2 466 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 GPSM1Q86YR5 675 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 PJA1Q8NG27 643 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 SH3KBP1Q96B97 665 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 PPA2Q9H2U2 334 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 GALPQ9UBC7 116 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 ZNF222Q9UK12 451 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 ING4Q9UNL4 249 aa15.41■□□□□ 0.06
DHFR-201ENST00000439211 MBLAC1A4D2B0 266 aaPredicted RBP15.4■□□□□ 0.06
DHFR-201ENST00000439211 CDC7O00311 574 aa15.4■□□□□ 0.06
DHFR-201ENST00000439211 CTDSP2O14595 271 aa15.4■□□□□ 0.06
DHFR-201ENST00000439211 S1PR4O95977 384 aa15.4■□□□□ 0.06
DHFR-201ENST00000439211 CYP11A1P05108 521 aa15.4■□□□□ 0.06
DHFR-201ENST00000439211 SLC2A4P14672 509 aa15.4■□□□□ 0.06
DHFR-201ENST00000439211 GPR85P60893 370 aa15.4■□□□□ 0.06
DHFR-201ENST00000439211 NRG1Q02297 640 aaPredicted RBP15.4■□□□□ 0.06
DHFR-201ENST00000439211 LCP2Q13094 533 aa15.4■□□□□ 0.06
DHFR-201ENST00000439211 GRB14Q14449 540 aa15.4■□□□□ 0.06
DHFR-201ENST00000439211 SETMARQ53H47 684 aaPredicted RBP15.4■□□□□ 0.06
DHFR-201ENST00000439211 TRIQKQ629K1 86 aa15.4■□□□□ 0.06
DHFR-201ENST00000439211 PTRHD1Q6GMV3 140 aaKnown RBP15.4■□□□□ 0.06
DHFR-201ENST00000439211 XKRXQ6PP77 449 aa15.4■□□□□ 0.06
DHFR-201ENST00000439211 ZNF467Q7Z7K2 595 aaPredicted RBP15.4■□□□□ 0.06
DHFR-201ENST00000439211 SLC38A4Q969I6 547 aa15.4■□□□□ 0.06
DHFR-201ENST00000439211 TREX1Q9NSU2 369 aa15.4■□□□□ 0.06
DHFR-201ENST00000439211 TTC3P53804 2025 aa15.4■□□□□ 0.06
DHFR-201ENST00000439211 UBFD1O14562 309 aaKnown RBP15.4■□□□□ 0.06
DHFR-201ENST00000439211 FFAR3O14843 346 aa15.4■□□□□ 0.06
DHFR-201ENST00000439211 GPR42O15529 346 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms