RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 KCNK1O00180 336 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 OR2B3O76000 313 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 CD48P09326 243 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 CBSLP0DN79 551 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 ST6GAL1P15907 406 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 MMP11P24347 488 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 CBSP35520 551 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 SPAM1P38567 509 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 PRKCIP41743 596 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 LMAN1P49257 510 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 ARSEP51690 589 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 PPIDQ08752 370 aaKnown RBP8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 ITGA9Q13797 1035 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 INAQ16352 499 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 ASIC2Q16515 512 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 PPP2R5EQ16537 467 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 ZNF324BQ6AW86 544 aaPredicted RBP8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 XKRXQ6PP77 449 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 CDHR3Q6ZTQ4 885 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 ZNF571Q7Z3V5 609 aaPredicted RBP8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 MRGPRGQ86SM5 289 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 CNTD1Q8N815 330 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 KCTD6Q8NC69 237 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 OR2L2Q8NH16 312 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 TADA1Q96BN2 335 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 FAF2Q96CS3 445 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 CNDP1Q96KN2 507 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 LMF1Q96S06 567 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 ASPNQ9BXN1 380 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 TRIM8Q9BZR9 551 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 RNF32Q9H0A6 362 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 TFB2MQ9H5Q4 396 aaKnown RBP8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 HAUS4Q9H6D7 363 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 MRM3Q9HC36 420 aaKnown RBP8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 BPIFA1Q9NP55 256 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 FANCLQ9NW38 375 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 SMOXQ9NWM0 555 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 AIPL1Q9NZN9 384 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 IFT80Q9P2H3 777 aaPredicted RBP8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 CSAG2Q9Y5P2 127 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 GTF3C1Q12789 2109 aa8.09□□□□□ -1.11
NIF3L1-208ENST00000436412 NUP210LQ5VU65 1888 aa8.09□□□□□ -1.12
NIF3L1-208ENST00000436412 CSPG4Q6UVK1 2322 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 ATRQ13535 2644 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 NCOA6Q14686 2063 aaPredicted RBP8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 GLYATL1P3A0A0U1RQE8 302 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 C2orf74A8MZ97 194 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 H3BMH7 237 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 MYO1FO00160 1098 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 DDX3XO00571 662 aaKnown RBP eCLIP8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 PCDH17O14917 1159 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 AURKAO14965 403 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 UGT1A9O60656 530 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 UMODP07911 640 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 UGT1A6P19224 532 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 MSH3P20585 1137 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 AGAP20933 346 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 UGT1A1P22309 533 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 UGT1A4P22310 534 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 GBE1Q04446 702 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 SLC10A2Q12908 348 aaPredicted RBP8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 ZBTB17Q13105 803 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 PRKD1Q15139 912 aaPredicted RBP8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 NKAIN1Q4KMZ8 207 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 FNBP1LQ5T0N5 605 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 GPRC6AQ5T6X5 926 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 DUS1LQ6P1R4 473 aaKnown RBP8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 TLDC1Q6P9B6 456 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 SARM1Q6SZW1 724 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 ISLR2Q6UXK2 745 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 HOOK3Q86VS8 718 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 DENND1AQ8TEH3 1009 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 LINC00615Q96LM1 132 aaPredicted RBP8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 LHPPQ9H008 270 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 NUP62CLQ9H1M0 184 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 UGT1A7Q9HAW7 530 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 UGT1A10Q9HAW8 530 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 UGT1A8Q9HAW9 530 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 SLC6A20Q9NP91 592 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 TXLNGQ9NUQ3 528 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 HACD3Q9P035 362 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 IL17CQ9P0M4 197 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 FBXL4Q9UKA2 621 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 CDYLQ9Y232 598 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 TLN2Q9Y4G6 2542 aa8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 SNRNP200O75643 2136 aaKnown RBP8.08□□□□□ -1.12
NIF3L1-208ENST00000436412 C17orf113A0A1B0GUU1 675 aa8.07□□□□□ -1.12
NIF3L1-208ENST00000436412 SLC22A31A6NKX4 558 aa8.07□□□□□ -1.12
NIF3L1-208ENST00000436412 LRRC53A6NM62 1247 aa8.07□□□□□ -1.12
NIF3L1-208ENST00000436412 BTN3A3O00478 584 aa8.07□□□□□ -1.12
NIF3L1-208ENST00000436412 BTN3A1O00481 513 aa8.07□□□□□ -1.12
NIF3L1-208ENST00000436412 RGS13O14921 159 aa8.07□□□□□ -1.12
NIF3L1-208ENST00000436412 ZSCAN9O15535 394 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-208ENST00000436412 KCNN4O15554 427 aa8.07□□□□□ -1.12
NIF3L1-208ENST00000436412 CNOT3O75175 753 aaKnown RBP8.07□□□□□ -1.12
NIF3L1-208ENST00000436412 UBOX5O94941 541 aa8.07□□□□□ -1.12
NIF3L1-208ENST00000436412 ONECUT2O95948 504 aa8.07□□□□□ -1.12
NIF3L1-208ENST00000436412 EPOP01588 193 aa8.07□□□□□ -1.12
NIF3L1-208ENST00000436412 PIM1P11309 404 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-208ENST00000436412 CDK11BP21127 795 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms