RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 DYRK1BQ9Y463 629 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 TRAF6Q9Y4K3 522 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 NDUFAB1O14561 156 aa22.25■■□□□ 1.15
CPSF4-204ENST00000436336 AZIN1O14977 448 aa22.25■■□□□ 1.15
CPSF4-204ENST00000436336 SNX3O60493 162 aa22.25■■□□□ 1.15
CPSF4-204ENST00000436336 OR4F21O95013 312 aa22.25■■□□□ 1.15
CPSF4-204ENST00000436336 ERVPABLB-1P60509 514 aa22.25■■□□□ 1.15
CPSF4-204ENST00000436336 PCDH1Q08174 1060 aa22.25■■□□□ 1.15
CPSF4-204ENST00000436336 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.25■■□□□ 1.15
CPSF4-204ENST00000436336 LAIR1Q6GTX8 287 aa22.25■■□□□ 1.15
CPSF4-204ENST00000436336 KANSL1Q7Z3B3 1105 aa22.25■■□□□ 1.15
CPSF4-204ENST00000436336 SPATA21Q7Z572 469 aa22.25■■□□□ 1.15
CPSF4-204ENST00000436336 GPR156Q8NFN8 814 aa22.25■■□□□ 1.15
CPSF4-204ENST00000436336 SH3KBP1Q96B97 665 aa22.25■■□□□ 1.15
CPSF4-204ENST00000436336 CDK15Q96Q40 435 aa22.25■■□□□ 1.15
CPSF4-204ENST00000436336 SRMSQ9H3Y6 488 aa22.25■■□□□ 1.15
CPSF4-204ENST00000436336 VTI1BQ9UEU0 232 aa22.25■■□□□ 1.15
CPSF4-204ENST00000436336 A0A1W2PPV9 198 aa22.24■■□□□ 1.15
CPSF4-204ENST00000436336 FAM221BA6H8Z2 402 aa22.24■■□□□ 1.15
CPSF4-204ENST00000436336 MATN2O00339 956 aa22.24■■□□□ 1.15
CPSF4-204ENST00000436336 CLGNO14967 610 aa22.24■■□□□ 1.15
CPSF4-204ENST00000436336 CLDN9O95484 217 aa22.24■■□□□ 1.15
CPSF4-204ENST00000436336 GIMD1P0DJR0 217 aa22.24■■□□□ 1.15
CPSF4-204ENST00000436336 GNAZP19086 355 aa22.24■■□□□ 1.15
CPSF4-204ENST00000436336 CCT8P50990 548 aa22.24■■□□□ 1.15
CPSF4-204ENST00000436336 MAZP56270 477 aaKnown RBP22.24■■□□□ 1.15
CPSF4-204ENST00000436336 TERF2Q15554 542 aa22.24■■□□□ 1.15
CPSF4-204ENST00000436336 LETMD1Q6P1Q0 360 aa22.24■■□□□ 1.15
CPSF4-204ENST00000436336 TMEM26Q6ZUK4 368 aa22.24■■□□□ 1.15
CPSF4-204ENST00000436336 HOMEZQ8IX15 550 aa22.24■■□□□ 1.15
CPSF4-204ENST00000436336 OR4E2Q8NGC2 313 aa22.24■■□□□ 1.15
CPSF4-204ENST00000436336 SAP25Q8TEE9 199 aa22.24■■□□□ 1.15
CPSF4-204ENST00000436336 THOC1Q96FV9 657 aaKnown RBP22.24■■□□□ 1.15
CPSF4-204ENST00000436336 MAGEB10Q96LZ2 347 aaPredicted RBP22.24■■□□□ 1.15
CPSF4-204ENST00000436336 ACTR8Q9H981 624 aa22.24■■□□□ 1.15
CPSF4-204ENST00000436336 TRPS1Q9UHF7 1281 aa22.24■■□□□ 1.15
CPSF4-204ENST00000436336 USH1CQ9Y6N9 552 aa22.24■■□□□ 1.15
CPSF4-204ENST00000436336 CABIN1Q9Y6J0 2220 aa22.24■■□□□ 1.15
CPSF4-204ENST00000436336 TMEM233B4DJY2 109 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 UGDHO60701 494 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 CRCPO75575 148 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 ENO1P06733 434 aaKnown RBP22.23■■□□□ 1.15
CPSF4-204ENST00000436336 ALOX15P16050 662 aaPredicted RBP22.23■■□□□ 1.15
CPSF4-204ENST00000436336 C14orf28Q4W4Y0 310 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 GKAP1Q5VSY0 366 aaPredicted RBP22.23■■□□□ 1.15
CPSF4-204ENST00000436336 KANK2Q63ZY3 851 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 CHCHD4Q8N4Q1 142 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 DCBLD1Q8N8Z6 715 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 JPH3Q8WXH2 748 aaPredicted RBP22.23■■□□□ 1.15
CPSF4-204ENST00000436336 UCK1Q9HA47 277 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 IL21RQ9HBE5 538 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 NLGN3Q9NZ94 848 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 FIS1Q9Y3D6 152 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 KHNYNO15037 678 aaKnown RBP22.23■■□□□ 1.15
CPSF4-204ENST00000436336 HDAC3O15379 428 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 UROSP10746 265 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 HGFP14210 728 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 FOXA1P55317 472 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 GGTA1PQ4G0N0 100 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 PLA2G2CQ5R387 149 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 CLEC6AQ6EIG7 209 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 RFWD2Q8NHY2 731 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 NEIL2Q969S2 332 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 KCNA7Q96RP8 456 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 DUSP23Q9BVJ7 150 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 TAC3Q9UHF0 121 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 GMEB2Q9UKD1 530 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 PCDHB11Q9Y5F2 797 aa22.23■■□□□ 1.15
CPSF4-204ENST00000436336 DNAH14Q0VDD8 3507 aa22.22■■□□□ 1.15
CPSF4-204ENST00000436336 SNRNP200O75643 2136 aaKnown RBP22.22■■□□□ 1.15
CPSF4-204ENST00000436336 E7EQ34 232 aa22.22■■□□□ 1.15
CPSF4-204ENST00000436336 PRICKLE3O43900 615 aaPredicted RBP22.22■■□□□ 1.15
CPSF4-204ENST00000436336 WFS1O76024 890 aa22.22■■□□□ 1.15
CPSF4-204ENST00000436336 IRF8Q02556 426 aa22.22■■□□□ 1.15
CPSF4-204ENST00000436336 CHIT1Q13231 466 aa22.22■■□□□ 1.15
CPSF4-204ENST00000436336 E2F2Q14209 437 aa22.22■■□□□ 1.15
CPSF4-204ENST00000436336 LIPJQ5W064 366 aa22.22■■□□□ 1.15
CPSF4-204ENST00000436336 ARL10Q8N8L6 244 aa22.22■■□□□ 1.15
CPSF4-204ENST00000436336 CDYL2Q8N8U2 506 aa22.22■■□□□ 1.15
CPSF4-204ENST00000436336 L3MBTL4Q8NA19 623 aa22.22■■□□□ 1.15
CPSF4-204ENST00000436336 SLC5A11Q8WWX8 675 aa22.22■■□□□ 1.15
CPSF4-204ENST00000436336 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.22■■□□□ 1.15
CPSF4-204ENST00000436336 TWSG1Q9GZX9 223 aa22.22■■□□□ 1.15
CPSF4-204ENST00000436336 KCNK13Q9HB14 408 aa22.22■■□□□ 1.15
CPSF4-204ENST00000436336 DCTN4Q9UJW0 460 aa22.22■■□□□ 1.15
CPSF4-204ENST00000436336 RNF11Q9Y3C5 154 aa22.22■■□□□ 1.15
CPSF4-204ENST00000436336 HEATR5BQ9P2D3 2071 aa22.22■■□□□ 1.15
CPSF4-204ENST00000436336 ZNF195O14628 629 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 PPM1DO15297 605 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 PRAMEF4O60810 478 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 CAPN1P07384 714 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 CHRM5P08912 532 aaPredicted RBP22.21■■□□□ 1.15
CPSF4-204ENST00000436336 ALPPL2P10696 532 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 AQP5P55064 265 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 TCF15Q12870 199 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 SF3A3Q12874 501 aaKnown RBP eCLIP22.21■■□□□ 1.153e-6■■■■□ 19.7
CPSF4-204ENST00000436336 BIRC2Q13490 618 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 CCDC6Q16204 474 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 UGT3A2Q3SY77 523 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 XKR6Q5GH73 641 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms