RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 OR6N1Q8NGY5 312 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 ELAC1Q9H777 363 aaKnown RBP8.75□□□□□ -1.01
CTNND1-208ENST00000428599 BRF2Q9HAW0 419 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 TESMINQ9Y4I5 508 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 RGPD5Q99666 1765 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 SAGE2PA6NJ88 616 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 IRAK2O43187 625 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 HSPA12AO43301 675 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 CBFA2T3O75081 653 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 HEXBP07686 556 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 CSKP41240 450 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 CLCN4P51793 760 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 TARDBPQ13148 414 aaKnown RBP eCLIP8.75□□□□□ -1.011e-8■■■■□ 21.9
CTNND1-208ENST00000428599 DPY19L1Q2PZI1 675 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 TTMPQ5BVD1 217 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 GDPD4Q6W3E5 623 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 ADGRD2Q7Z7M1 963 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 LRRTM4Q86VH4 590 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 PIWIL1Q96J94 861 aaKnown RBP8.75□□□□□ -1.01
CTNND1-208ENST00000428599 HAPLN3Q96S86 360 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 Q9N2J8 555 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 POLR3BQ9NW08 1133 aaPredicted RBP8.75□□□□□ -1.01
CTNND1-208ENST00000428599 M0R129 80 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 AGPSO00116 658 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 FSCN2O14926 492 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 CCNOP22674 350 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 YAP1P46937 504 aaKnown RBP8.74□□□□□ -1.01
CTNND1-208ENST00000428599 PTDSS1P48651 473 aaKnown RBP8.74□□□□□ -1.01
CTNND1-208ENST00000428599 RABGGTBP53611 331 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 IDNKQ5T6J7 187 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 PRAMEF17Q5VTA0 474 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 C3orf33Q6P1S2 294 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 MON1BQ7L1V2 547 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 MMAAQ8IVH4 418 aaKnown RBP8.74□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF101Q8IZC7 436 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 OXR1Q8N573 874 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 GLB1L3Q8NCI6 653 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-208ENST00000428599 C8orf48Q96LL4 319 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 DUSP26Q9BV47 211 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 MECRQ9BV79 373 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 NPLQ9BXD5 320 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-208ENST00000428599 NUSAP1Q9BXS6 441 aaKnown RBP8.74□□□□□ -1.01
CTNND1-208ENST00000428599 ITM2CQ9NQX7 267 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 CHRAC1Q9NRG0 131 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 PCDH10Q9P2E7 1040 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 NDUFS4O43181 175 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 KRT36O76013 467 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 ANGPTL1O95841 491 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 HMGN1P05114 100 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 ERCC1P07992 297 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-208ENST00000428599 SLC1A2P43004 574 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 GLP1RP43220 463 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 ST3GAL4Q11206 333 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 TUBB3Q13509 450 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF792Q3KQV3 632 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 ARSIQ5FYB1 569 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 REP15Q6BDI9 236 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 CNKSR3Q6P9H4 555 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 TAC4Q86UU9 113 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 KLHL36Q8N4N3 616 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 FAM47BQ8NA70 645 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 ADAD1Q96M93 576 aaKnown RBP8.74□□□□□ -1.01
CTNND1-208ENST00000428599 SP140LQ9H930 580 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 MAFFQ9ULX9 164 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 COMMD3-BMI1R4GMX3 469 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 A0A1W2PRQ8 180 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 A0A1W2PRU2 124 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 PCDH7O60245 1069 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 SRPRAP08240 638 aaKnown RBP8.74□□□□□ -1.01
CTNND1-208ENST00000428599 GP1BBP13224 206 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 UGT1A1P22309 533 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 BNIP1Q12981 228 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 CDK10Q15131 360 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 GRHL2Q6ISB3 625 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 AHSA2Q719I0 299 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 CLPTM1LQ96KA5 538 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 ZSCAN5AQ9BUG6 496 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 METTL8Q9H825 291 aaKnown RBP8.74□□□□□ -1.01
CTNND1-208ENST00000428599 TVP23BQ9NYZ1 205 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF221Q9UK13 617 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 DGKBQ9Y6T7 804 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 A0A1W2PRB8 838 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 FAM221BA6H8Z2 402 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 RUNDC3AQ59EK9 446 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 PGM2L1Q6PCE3 622 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 SLC44A3Q8N4M1 653 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 KCNJ9Q92806 393 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 NTPCRQ9BSD7 190 aaKnown RBP8.74□□□□□ -1.01
CTNND1-208ENST00000428599 ALG2Q9H553 416 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 APOBEC3GQ9HC16 384 aaKnown RBP8.74□□□□□ -1.01
CTNND1-208ENST00000428599 HTR3EA5X5Y0 456 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 OR2AT4A6NND4 320 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 OR4F21O95013 312 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 FARS2O95363 451 aaKnown RBP8.74□□□□□ -1.01
CTNND1-208ENST00000428599 ITGA5P08648 1049 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 DRG2P55039 364 aaKnown RBP8.74□□□□□ -1.01
CTNND1-208ENST00000428599 MPP1Q00013 466 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 ZFP69Q49AA0 526 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 ALG10BQ5I7T1 473 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 MBLAC2Q68D91 279 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms