RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 DPP8Q6V1X1 898 aaPredicted RBP5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 LARP4Q71RC2 724 aaKnown RBP eCLIP5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 BTN2A1Q7KYR7 527 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 SNX20Q7Z614 316 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 NECAB2Q7Z6G3 386 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 FGD2Q7Z6J4 655 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 B3GNT8Q7Z7M8 397 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZNF605Q86T29 641 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 KCNMB4Q86W47 210 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 CBWD2Q8IUF1 395 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 NKAIN4Q8IVV8 208 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 NAXDQ8IW45 347 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 SKA3Q8IX90 412 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 CENPLQ8N0S6 344 aaPredicted RBP5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 SLC37A3Q8NCC5 494 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 DENND6BQ8NEG7 585 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 OR4A15Q8NGL6 344 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZNF675Q8TD23 568 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 NANOS1Q8WY41 292 aaKnown RBP5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 MARC2Q969Z3 335 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 FAM162AQ96A26 154 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZNF669Q96BR6 464 aaPredicted RBP5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 GPRASP2Q96D09 838 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 L3HYPDHQ96EM0 354 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 PDLIM5Q96HC4 596 aaKnown RBP5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 GMCL1Q96IK5 515 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 FYTTD1Q96QD9 318 aaKnown RBP5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 OR2M2Q96R28 347 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 PITX2Q99697 317 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 MARVELD1Q9BSK0 173 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 HDHD5Q9BXW7 423 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 TRIM8Q9BZR9 551 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 SRRQ9GZT4 340 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 RNF32Q9H0A6 362 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 SIK2Q9H0K1 926 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 QRSL1Q9H0R6 528 aaKnown RBP5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 DNTTIP1Q9H147 329 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 PRDM12Q9H4Q4 367 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 OPA3Q9H6K4 179 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 ACTR8Q9H981 624 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 IL1RAPQ9NPH3 570 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 CHRAC1Q9NRG0 131 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 GKN1Q9NS71 199 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZNF275Q9NSD4 429 aaPredicted RBP5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 UFSP2Q9NUQ7 469 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 XPR1Q9UBH6 696 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 SPASTQ9UBP0 616 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 RGS17Q9UGC6 210 aaPredicted RBP5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 POLG2Q9UHN1 485 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 SCP2D1Q9UJQ7 156 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 RPS6KA6Q9UK32 745 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 SLC39A10Q9ULF5 831 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 EDARQ9UNE0 448 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 SNX6Q9UNH7 406 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 MFHAS1Q9Y4C4 1052 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 CSADQ9Y600 493 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 OAS3Q9Y6K5 1087 aaKnown RBP5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 FOCADQ5VW36 1801 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 PHLPP1O60346 1717 aa5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 FRMPD2Q68DX3 1309 aaPredicted RBP5.48□□□□□ -1.53
VTI1BP4-201ENST00000427516 PTPRFP10586 1907 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 A0A0A6YYJ9 748 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 FAM86C2PA6NEL3 165 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 CLCA1A8K7I4 914 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 A8MVJ9 347 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 NUDT19A8MXV4 375 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 AIPO00170 330 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 ANKRD28O15084 1053 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 B4GAT1O43505 415 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 GPR37L1O60883 481 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 SEC22BO75396 215 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 STX11O75558 287 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 CRTAPO75718 401 aaPredicted RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 SLC22A3O75751 556 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 SC5DO75845 299 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 CCNB2O95067 398 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 HTR3BO95264 441 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 ATG7O95352 703 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 CALCAP01258 141 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 HMGCRP04035 888 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 PRKCGP05129 697 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 ADRB1P08588 477 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 LTA4HP09960 611 aaKnown RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 HSMCR30P0CW71 290 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 SLC2A2P11168 524 aaPredicted RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 SFTPCP11686 197 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 LCP1P13796 627 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 ARSBP15848 533 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 CTPS1P17812 591 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 HK1P19367 917 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 FPR1P21462 350 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 GADD45AP24522 165 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 DNAJA1P31689 397 aaKnown RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 AKT1P31749 480 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 ARRB2P32121 409 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 SCNN1AP37088 669 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 MMP12P39900 470 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 CD79BP40259 229 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 GYG1P46976 350 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms