RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 FKBP9O95302 570 aa17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 ITGAXP20702 1163 aa17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 MCM3P25205 808 aa17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 PMS2P54278 862 aa17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 NCF4Q15080 339 aa17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 TTLL9Q3SXZ7 439 aa17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 RBM20Q5T481 1227 aaKnown RBP17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 STEAP4Q687X5 459 aa17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 FBXO42Q6P3S6 717 aa17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 TRMT10BQ6PF06 316 aaKnown RBP17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 SUSD1Q6UWL2 747 aa17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 PTRH1Q86Y79 214 aaKnown RBP17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 APLFQ8IW19 511 aaPredicted RBP17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 LRRC56Q8IYG6 542 aaPredicted RBP17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 THAP4Q8WY91 577 aa17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 DLG3Q92796 817 aa17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 CERS2Q96G23 380 aa17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 TRIM31Q9BZY9 425 aa17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 CCDC68Q9H2F9 335 aa17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 SYNPO2LQ9H987 977 aa17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 TLK1Q9UKI8 766 aa17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 SNX24Q9Y343 169 aa17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 GCN1Q92616 2671 aaKnown RBP17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 BAHCC1Q9P281 2608 aa17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 COL6A6A6NMZ7 2263 aa17.59■□□□□ 0.41
SMARCAL1-205ENST00000425815 IGKV1-8A0A0C4DH67 115 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 SMAPO00193 183 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 DNAJB5O75953 348 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 CATP04040 527 aaKnown RBP17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 ENO3P13929 434 aaPredicted RBP17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 AGXTP21549 392 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 RPL21P46778 160 aaKnown RBP17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 CDKN2DP55273 166 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 FOXL2P58012 376 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 DCDP81605 110 aaKnown RBP17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 CBLBQ13191 982 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 ARHGAP19Q14CB8 494 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 CPZQ66K79 652 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 FRMPD2BQ6IN97 320 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 PIWIL4Q7Z3Z4 852 aaKnown RBP17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 PDIK1LQ8N165 341 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 RAB42Q8N4Z0 105 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 PPFIBP2Q8ND30 876 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 PROKR1Q8TCW9 393 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 ZNF480Q8WV37 535 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 EEF1AKMT1Q8WVE0 214 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 SMPDL3AQ92484 453 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 SEC14L1Q92503 715 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 ACAT2Q9BWD1 397 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 SLC6A20Q9NP91 592 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 FAM114A2Q9NRY5 505 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 INTS7Q9NVH2 962 aaKnown RBP17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 ZC3H7BQ9UGR2 993 aaKnown RBP17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 SNX7Q9UNH6 387 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 CHMP2BQ9UQN3 213 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 MAN2B2Q9Y2E5 1009 aa17.58■□□□□ 0.4
SMARCAL1-205ENST00000425815 LOC105369274A0A096LPK9 316 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 LOC102723532A0A0G2JNH3 316 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 OR2A25A4D2G3 310 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 FITM1A5D6W6 292 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 E7ENX8 843 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 PYCARD-AS1I3L0S3 204 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 SLC28A2O43868 658 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 VPS26AO75436 327 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 MED26O95402 600 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 SLC16A8O95907 504 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 ONECUT2O95948 504 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 NR1D1P20393 614 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 SKIV2L2P42285 1042 aaKnown RBP17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 PGGT1BP53609 377 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 PNLIPRP1P54315 467 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 TAP2Q03519 686 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 ZC3H12BQ5HYM0 836 aaKnown RBP17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 MLIPQ5VWP3 458 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 MRPL14Q6P1L8 145 aaKnown RBP17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 PAQR3Q6TCH7 311 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 KIAA0408Q6ZU52 694 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 GALNT7Q86SF2 657 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 OR4N4Q8N0Y3 316 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 SPATA4Q8NEY3 305 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 C9orf43Q8TAL5 461 aaPredicted RBP17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 LRRC39Q96DD0 335 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 CFAP36Q96G28 342 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 SNF8Q96H20 258 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 ADAMTS6Q9UKP5 1117 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 SRPK3Q9UPE1 567 aa17.57■□□□□ 0.4
SMARCAL1-205ENST00000425815 EFCAB8A8MWE9 144 aa17.56■□□□□ 0.4
SMARCAL1-205ENST00000425815 E7ESA3 106 aa17.56■□□□□ 0.4
SMARCAL1-205ENST00000425815 J3QKU1 62 aa17.56■□□□□ 0.4
SMARCAL1-205ENST00000425815 PDGFAP04085 211 aa17.56■□□□□ 0.4
SMARCAL1-205ENST00000425815 ALAS2P22557 587 aa17.56■□□□□ 0.4
SMARCAL1-205ENST00000425815 HSD17B2P37059 387 aa17.56■□□□□ 0.4
SMARCAL1-205ENST00000425815 ARL4CP56559 192 aa17.56■□□□□ 0.4
SMARCAL1-205ENST00000425815 CHAF1BQ13112 559 aa17.56■□□□□ 0.4
SMARCAL1-205ENST00000425815 FRG1Q14331 258 aaKnown RBP17.56■□□□□ 0.4
SMARCAL1-205ENST00000425815 FASTKD3Q14CZ7 662 aaKnown RBP17.56■□□□□ 0.4
SMARCAL1-205ENST00000425815 HIF1AQ16665 826 aa17.56■□□□□ 0.4
SMARCAL1-205ENST00000425815 NKAIN1Q4KMZ8 207 aa17.56■□□□□ 0.4
SMARCAL1-205ENST00000425815 WASHC2DQ5SRD0 308 aa17.56■□□□□ 0.4
SMARCAL1-205ENST00000425815 RNF44Q7L0R7 432 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms