RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 CNOT3O75175 753 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 SERPINA7P05543 415 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PKMP14618 531 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 FBLP22087 321 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ADRA1DP25100 572 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 TTPAP49638 278 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 KLC1Q07866 573 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 OLIG2Q13516 323 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 SKOR2Q2VWA4 1001 aaPredicted RBP11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 MRGPRGQ86SM5 289 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PIANPQ8IYJ0 282 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 SYCE1Q8N0S2 351 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 EID3Q8N140 333 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 FAM71DQ8N9W8 422 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CATSPER1Q8NEC5 780 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 MCOLN3Q8TDD5 553 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 NR4A3Q92570 626 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 HDAC10Q969S8 669 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 RERGQ96A58 199 aaPredicted RBP11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CABS1Q96KC9 395 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 SPSB2Q99619 263 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 UNKQ9C0B0 810 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 SLC22A11Q9NSA0 550 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 C14orf105Q9NVL8 296 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 AMFRQ9UKV5 643 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 MAU2Q9Y6X3 613 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 SPTBN1Q01082 2364 aaKnown RBP11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 FITM1A5D6W6 292 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 MROH6A6NGR9 719 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 MASP2O00187 686 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 HCRTR1O43613 425 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 NDUFS3O75489 264 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 HTR1EP28566 365 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 FDFT1P37268 417 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 EMP3P54852 163 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 NDUFA9Q16795 377 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 NAPRTQ6XQN6 538 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 OTOAQ7RTW8 1153 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 SDCCAG8Q86SQ7 713 aaPredicted RBP11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 TAX1BP1Q86VP1 789 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 LRRC6Q86X45 466 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PRSS58Q8IYP2 241 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 LMNTD1Q8N9Z9 388 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 FAM98AQ8NCA5 519 aaKnown RBP11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 FLVCR1-AS1Q8TAF5 88 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 KRT35Q92764 455 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PEX13Q92968 403 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 MVB12AQ96EY5 273 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 NRTNQ99748 197 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 SLX1AQ9BQ83 275 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 GORASP1Q9BQQ3 440 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 GOLPH3Q9H4A6 298 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 GPAMQ9HCL2 828 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 STMN3Q9NZ72 180 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 TRPC4Q9UBN4 977 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 GNPTGQ9UJJ9 305 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 RIMKLBQ9ULI2 386 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 TTC7AQ9ULT0 858 aaPredicted RBP11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 KLHL20Q9Y2M5 609 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CSAG2Q9Y5P2 127 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PRSS21Q9Y6M0 314 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 TEX15Q9BXT5 2789 aa11.72□□□□□ -0.53
HLA-DQB3-203ENST00000425319 A0A0J9YVX5 310 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CCDC162PA2VCL2 907 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PRMT5O14744 637 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ALOX12BO75342 701 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 GPC4O75487 556 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 KLHL18O94889 574 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 UNC5CO95185 931 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CCNDBP1O95273 360 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 GOT2P00505 430 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PRSS56P0CW18 603 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CCR7P32248 378 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 HSD17B2P37059 387 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 TNFSF10P50591 281 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 TSTD2Q5T7W7 516 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 GARNL3Q5VVW2 1013 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ATG9BQ674R7 924 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 KCTD11Q693B1 232 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 BNC2Q6ZN30 1099 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 FAM20CQ8IXL6 584 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 METTL27Q8N6F8 245 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 OTUD6BQ8N6M0 293 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 HORMAD2Q8N7B1 307 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PPHLN1Q8NEY8 458 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 MIPEPQ99797 713 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 FAM118BQ9BPY3 351 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ZFYVE21Q9BQ24 234 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 MKKSQ9NPJ1 570 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ENAMQ9NRM1 1142 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CTSFQ9UBX1 484 aa11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 C19orf25Q9UFG5 118 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQB3-203ENST00000425319 USP9XQ93008 2570 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 MIF4GDA9UHW6 222 aaKnown RBP11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 H3BMM5 538 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 E2F3O00716 465 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TTI1O43156 1089 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 SLCO2B1O94956 709 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 METTL18O95568 372 aa11.7□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CTSBP07858 339 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms