RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TLX2O43763 284 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-203ENST00000424270 NME2P1O60361 137 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 MAFKO60675 156 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 FGFR1OPO95684 399 aaKnown RBP5.98□□□□□ -1.45
SDCBP-203ENST00000424270 CYP1A1P04798 512 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-203ENST00000424270 NEFLP07196 543 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 ANXA5P08758 320 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 C8orf89P0DMQ9 161 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 GLI4P10075 376 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 FPR1P21462 350 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 NME2P22392 152 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 MMP8P22894 467 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 SHMT2P34897 504 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 SERPINB6P35237 376 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 CD86P42081 329 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 GRIA3P42263 894 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 TNNT3P45378 269 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-203ENST00000424270 ASCL1P50553 236 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 EFNA3P52797 238 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 NR1H2P55055 460 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 KRT85P78386 507 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 SRSF2Q01130 221 aaKnown RBP5.98□□□□□ -1.45
SDCBP-203ENST00000424270 PLGLB1Q02325 96 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 VEZF1Q14119 521 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 PCSK7Q16549 785 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 PDLIM3Q53GG5 364 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-203ENST00000424270 ZC3H12BQ5HYM0 836 aaKnown RBP5.98□□□□□ -1.45
SDCBP-203ENST00000424270 WIPI1Q5MNZ9 446 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-203ENST00000424270 ERMARDQ5T6L9 678 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 FAM151BQ6UXP7 276 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 CRLF3Q8IUI8 442 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 LIX1LQ8IVB5 337 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 FAM71AQ8IYT1 594 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 ADGRF3Q8IZF5 1079 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 DNAJC22Q8N4W6 341 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 DTWD1Q8N5C7 304 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 OR2L2Q8NH16 312 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 CREB3L4Q8TEY5 395 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 NELFBQ8WX92 580 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 RNASE6Q93091 150 aaKnown RBP5.98□□□□□ -1.45
SDCBP-203ENST00000424270 SMARCE1Q969G3 411 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 DCUN1D1Q96GG9 259 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 DHTKD1Q96HY7 919 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-203ENST00000424270 CABS1Q96KC9 395 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 PIP5K1AQ99755 562 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 PLCD4Q9BRC7 762 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 SNRNP25Q9BV90 132 aaKnown RBP5.98□□□□□ -1.45
SDCBP-203ENST00000424270 ZNF700Q9H0M5 742 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 TFB2MQ9H5Q4 396 aaKnown RBP5.98□□□□□ -1.45
SDCBP-203ENST00000424270 EXO5Q9H790 373 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 SPTLC3Q9NUV7 552 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 INTS7Q9NVH2 962 aaKnown RBP5.98□□□□□ -1.45
SDCBP-203ENST00000424270 ACAD8Q9UKU7 415 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 FAM169AQ9Y6X4 670 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 VPS13CQ709C8 3753 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 KLHL33A6NCF5 533 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 MBD3L4A6NDZ8 208 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-203ENST00000424270 MBD3L5A6NJ08 208 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-203ENST00000424270 A8MV72 311 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-203ENST00000424270 RNF223E7ERA6 249 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 ACOT7O00154 380 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 NDC80O14777 642 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 BCKDKO14874 412 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 SLC16A5O15375 505 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 KDM1AO60341 852 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 UGT1A9O60656 530 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 RNF8O76064 485 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 PEX11BO96011 259 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 CALB1P05937 261 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 CHRM5P08912 532 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-203ENST00000424270 RALBP11234 206 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 SPTBP11277 2137 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 UGT1A6P19224 532 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 MAGP20916 626 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 PSMA2P25787 234 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 PON1P27169 355 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 PPP1R2P41236 205 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 GABRA4P48169 554 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 CYB561P49447 251 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 VSX2P58304 361 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-203ENST00000424270 COPS2P61201 443 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 GTF3C1Q12789 2109 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 MINDY4Q4G0A6 757 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 ATP13A4Q4VNC1 1196 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 PRMT9Q6P2P2 845 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 FIGLAQ6QHK4 219 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 UNC5AQ6ZN44 842 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 DAAM2Q86T65 1068 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 LGI4Q8N135 537 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 AMER2Q8N7J2 671 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 NAT14Q8WUY8 206 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 OR2A14Q96R47 310 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 SMC6Q96SB8 1091 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 MVB12BQ9H7P6 319 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 UGT1A7Q9HAW7 530 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 UGT1A10Q9HAW8 530 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 UGT1A8Q9HAW9 530 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 C14orf105Q9NVL8 296 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.97□□□□□ -1.454e-7■■■■□ 23.7
SDCBP-203ENST00000424270 C19orf25Q9UFG5 118 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms