RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.13■□□□□ 0.33
SBDSP1-202ENST00000423945 DHCR7Q9UBM7 475 aaKnown RBP17.13■□□□□ 0.33
SBDSP1-202ENST00000423945 SNX24Q9Y343 169 aa17.13■□□□□ 0.33
SBDSP1-202ENST00000423945 ANKRD12Q6UB98 2062 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 E7ESA3 106 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 SMAPO00193 183 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 ZSCAN9O15535 394 aaPredicted RBP17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 FKBP9O95302 570 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 PGGT1BP53609 377 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 CDKN2DP55273 166 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 ETF1P62495 437 aaKnown RBP17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 CBLBQ13191 982 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 HIF1AQ16665 826 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 C1orf189Q5VU69 101 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 SUSD1Q6UWL2 747 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 TMEM151BQ8IW70 566 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 LRRC56Q8IYG6 542 aaPredicted RBP17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 FBXO15Q8NCQ5 510 aaPredicted RBP17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 SPATA4Q8NEY3 305 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 LRRC39Q96DD0 335 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 ZNF285Q96NJ3 590 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 SLC25A18Q9H1K4 315 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 SYNPO2LQ9H987 977 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 SLC6A20Q9NP91 592 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 ENAMQ9NRM1 1142 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 ZC3H7BQ9UGR2 993 aaKnown RBP17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 TUBD1Q9UJT1 453 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 POLHQ9Y253 713 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 AP1M2Q9Y6Q5 423 aa17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 MDC1Q14676 2089 aaKnown RBP17.12■□□□□ 0.33
SBDSP1-202ENST00000423945 IGKV1-8A0A0C4DH67 115 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 TARM1B6A8C7 271 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 RAD51CO43502 376 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 CNOT3O75175 753 aaKnown RBP17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 SLC16A8O95907 504 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 CATP04040 527 aaKnown RBP17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 HBQ1P09105 142 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 ENO3P13929 434 aaPredicted RBP17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 ITGAXP20702 1163 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 MCM3P25205 808 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 ARL4CP56559 192 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 C2orf54Q08AI8 447 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 NCF4Q15080 339 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 TLDC1Q6P9B6 456 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 SYT10Q6XYQ8 523 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 KIAA0408Q6ZU52 694 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 GALNT7Q86SF2 657 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 ZNF605Q86T29 641 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 ANKMY2Q8IV38 441 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 PPFIBP2Q8ND30 876 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 ZNF480Q8WV37 535 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 ZUFSPQ96AP4 578 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 TRIM55Q9BYV6 548 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 FAM117AQ9C073 453 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 FAM114A2Q9NRY5 505 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 SLC22A11Q9NSA0 550 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 INTS7Q9NVH2 962 aaKnown RBP17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 TCFL5Q9UL49 500 aa17.11■□□□□ 0.33
SBDSP1-202ENST00000423945 ASH1LQ9NR48 2969 aaKnown RBP17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 E7ENX8 843 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 EIF3FO00303 357 aaPredicted RBP17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 VPS26AO75436 327 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 SFTPCP11686 197 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 CASQ1P31415 396 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 SKIV2L2P42285 1042 aaKnown RBP17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 PNLIPRP1P54315 467 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 FOXL2P58012 376 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 TAP2Q03519 686 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 FRG1Q14331 258 aaKnown RBP17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 ARHGAP19Q14CB8 494 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 FRMPD2BQ6IN97 320 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 PAQR3Q6TCH7 311 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 RAB42Q8N4Z0 105 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 FBXO36Q8NEA4 188 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 EEF1AKMT1Q8WVE0 214 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 SMPDL3AQ92484 453 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 ABHD17AQ96GS6 310 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 DPH2Q9BQC3 489 aaPredicted RBP17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 ACAT2Q9BWD1 397 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 SLC7A5P2Q9GIP4 190 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 GRHL1Q9NZI5 618 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 ADAMTS6Q9UKP5 1117 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 PSAT1Q9Y617 370 aa17.1■□□□□ 0.33
SBDSP1-202ENST00000423945 FLNBO75369 2602 aaKnown RBP17.09■□□□□ 0.33
SBDSP1-202ENST00000423945 LOC105369274A0A096LPK9 316 aa17.09■□□□□ 0.33
SBDSP1-202ENST00000423945 LOC102723532A0A0G2JNH3 316 aa17.09■□□□□ 0.33
SBDSP1-202ENST00000423945 OR2A25A4D2G3 310 aa17.09■□□□□ 0.33
SBDSP1-202ENST00000423945 FAM187AA6NFU0 413 aa17.09■□□□□ 0.33
SBDSP1-202ENST00000423945 K7EM74 188 aa17.09■□□□□ 0.33
SBDSP1-202ENST00000423945 KLF7O75840 302 aaPredicted RBP17.09■□□□□ 0.33
SBDSP1-202ENST00000423945 DNAJB5O75953 348 aa17.09■□□□□ 0.33
SBDSP1-202ENST00000423945 MED26O95402 600 aa17.09■□□□□ 0.33
SBDSP1-202ENST00000423945 TSPAN12O95859 305 aa17.09■□□□□ 0.33
SBDSP1-202ENST00000423945 PMS2P54278 862 aa17.09■□□□□ 0.33
SBDSP1-202ENST00000423945 PDIA2Q13087 525 aaKnown RBP17.09■□□□□ 0.33
SBDSP1-202ENST00000423945 ZC3H12BQ5HYM0 836 aaKnown RBP17.09■□□□□ 0.33
SBDSP1-202ENST00000423945 CPZQ66K79 652 aa17.09■□□□□ 0.33
SBDSP1-202ENST00000423945 FBXO42Q6P3S6 717 aa17.09■□□□□ 0.33
SBDSP1-202ENST00000423945 UBE2R2Q712K3 238 aaPredicted RBP17.09■□□□□ 0.33
SBDSP1-202ENST00000423945 RNF44Q7L0R7 432 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms