RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 OR10T2Q8NGX3 314 aa16.22■□□□□ 0.19
PKP4-204ENST00000421462 EGLN2Q96KS0 407 aa16.22■□□□□ 0.19
PKP4-204ENST00000421462 PHOX2BQ99453 314 aa16.22■□□□□ 0.19
PKP4-204ENST00000421462 MROH8Q9H579 483 aa16.22■□□□□ 0.19
PKP4-204ENST00000421462 REEP1Q9H902 201 aa16.22■□□□□ 0.19
PKP4-204ENST00000421462 RANGRFQ9HD47 186 aaPredicted RBP16.22■□□□□ 0.19
PKP4-204ENST00000421462 CCDC177Q9NQR7 707 aaPredicted RBP16.22■□□□□ 0.19
PKP4-204ENST00000421462 DNMT3AQ9Y6K1 912 aaPredicted RBP16.22■□□□□ 0.19
PKP4-204ENST00000421462 SMIM30A4D0T7 59 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 CPNE3O75131 537 aaKnown RBP16.21■□□□□ 0.19
PKP4-204ENST00000421462 SH3BGRLO75368 114 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 ULK1O75385 1050 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 FGF1P05230 155 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 TNFRSF1BP20333 461 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 ZXDBP98169 803 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 SMARCB1Q12824 385 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 KIAA0040Q15053 153 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 CEP78Q5JTW2 689 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 KDM4DQ6B0I6 523 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 NEK10Q6ZWH5 1172 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 GALNT7Q86SF2 657 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 RGL4Q8IZJ4 473 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 TP53I13Q8NBR0 393 aaPredicted RBP16.21■□□□□ 0.19
PKP4-204ENST00000421462 CD200R1Q8TD46 325 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 APH1BQ8WW43 257 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 RTP3Q9BQQ7 232 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 THUMPD1Q9NXG2 353 aaKnown RBP16.21■□□□□ 0.19
PKP4-204ENST00000421462 NUFIP1Q9UHK0 495 aaKnown RBP16.21■□□□□ 0.19
PKP4-204ENST00000421462 NINQ8N4C6 2090 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 A0A0D9SEW6 157 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 AREL1O15033 823 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 KIAA0513O60268 411 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 CPSF4O95639 269 aaKnown RBP16.21■□□□□ 0.19
PKP4-204ENST00000421462 GLUD1P00367 558 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 OGNP20774 298 aaKnown RBP16.21■□□□□ 0.19
PKP4-204ENST00000421462 TSPYL5Q86VY4 417 aaPredicted RBP16.21■□□□□ 0.19
PKP4-204ENST00000421462 MDGA1Q8NFP4 955 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 SUN5Q8TC36 379 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 PPP3R2Q96LZ3 170 aa16.21■□□□□ 0.19
PKP4-204ENST00000421462 MEN1O00255 615 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 RGS14O43566 566 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 FABP3P05413 133 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 RETP07949 1114 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 GNPDA1P46926 289 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 TBX4P57082 545 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 IRF3Q14653 427 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 CDK10Q15131 360 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 CYP27C1Q4G0S4 372 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 MS4A13Q5J8X5 152 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 FBXL22Q6P050 247 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 ZNF621Q6ZSS3 439 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 SNX20Q7Z614 316 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 LRTM1Q9HBL6 345 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 AASDHPPTQ9NRN7 309 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 WWOXQ9NZC7 414 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 RAPGEFL1Q9UHV5 662 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 NDRG4Q9ULP0 352 aaKnown RBP16.2■□□□□ 0.18
PKP4-204ENST00000421462 DLGAP4Q9Y2H0 992 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 DICER1Q9UPY3 1922 aaKnown RBP16.2■□□□□ 0.18
PKP4-204ENST00000421462 H3BM21 787 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 TACR1P25103 407 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 DNAJA1P31689 397 aaKnown RBP16.2■□□□□ 0.18
PKP4-204ENST00000421462 MXD1Q05195 221 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 KEAP1Q14145 624 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 CTSL3PQ5NE16 218 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 ZNF551Q7Z340 670 aaPredicted RBP16.2■□□□□ 0.18
PKP4-204ENST00000421462 VANGL1Q8TAA9 524 aaPredicted RBP16.2■□□□□ 0.18
PKP4-204ENST00000421462 MYEOVQ96EZ4 313 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 POPDC3Q9HBV1 291 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 OGDHLQ9ULD0 1010 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 IGLV3-25P01717 112 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 FHP07954 510 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 HLA-DPA1P20036 260 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 RGRP47804 291 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 SMU1Q2TAY7 513 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 DALRD3Q5D0E6 543 aaKnown RBP16.2■□□□□ 0.18
PKP4-204ENST00000421462 OR4F3Q6IEY1 312 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 SPATA2LQ8IUW3 424 aaPredicted RBP16.2■□□□□ 0.18
PKP4-204ENST00000421462 CACTIN-AS1Q8N1I8 211 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 TMEM132CQ8N3T6 1108 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 KBTBD8Q8NFY9 601 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 FBLIM1Q8WUP2 373 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 CNPPD1Q9BV87 410 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 CARD8Q9Y2G2 431 aa16.2■□□□□ 0.18
PKP4-204ENST00000421462 RFXANKO14593 260 aa16.19■□□□□ 0.18
PKP4-204ENST00000421462 OTCP00480 354 aa16.19■□□□□ 0.18
PKP4-204ENST00000421462 ITGB1P05556 798 aa16.19■□□□□ 0.18
PKP4-204ENST00000421462 HOXB8P17481 243 aaPredicted RBP16.19■□□□□ 0.18
PKP4-204ENST00000421462 HOXC13P31276 330 aa16.19■□□□□ 0.18
PKP4-204ENST00000421462 SOX6P35712 828 aa16.19■□□□□ 0.18
PKP4-204ENST00000421462 GALK2Q01415 458 aa16.19■□□□□ 0.18
PKP4-204ENST00000421462 ELP6Q0PNE2 266 aa16.19■□□□□ 0.18
PKP4-204ENST00000421462 FADDQ13158 208 aa16.19■□□□□ 0.18
PKP4-204ENST00000421462 PROX2Q3B8N5 592 aa16.19■□□□□ 0.18
PKP4-204ENST00000421462 ZC3H12BQ5HYM0 836 aaKnown RBP16.19■□□□□ 0.18
PKP4-204ENST00000421462 ANGPTL8Q6UXH0 198 aa16.19■□□□□ 0.18
PKP4-204ENST00000421462 RAB43Q86YS6 212 aa16.19■□□□□ 0.18
PKP4-204ENST00000421462 UBQLNLQ8IYU4 475 aa16.19■□□□□ 0.18
PKP4-204ENST00000421462 CLDN19Q8N6F1 224 aa16.19■□□□□ 0.18
PKP4-204ENST00000421462 KIAA1958Q8N8K9 716 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms