RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 SLC35A5Q9BS91 424 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 BEX2Q9BXY8 128 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 BEX1Q9HBH7 125 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 FLRT1Q9NZU1 646 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 MYPNQ86TC9 1320 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 A0A1W2PRB8 838 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 A0A1W2PRQ8 180 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 ITGA10O75578 1167 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 ALPPP05187 535 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 CLUP10909 449 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 PRPS1L1P21108 318 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 ASPAP45381 313 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 OR3A3P47888 321 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 OR3A2P47893 321 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 PNLIPRP1P54315 467 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 PCLAFQ15004 111 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 OR5J2Q8NH18 312 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 MMP27Q9H306 513 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 METTL8Q9H825 291 aaKnown RBP12.08□□□□□ -0.48
CLCN4-203ENST00000421085 MTMR10Q9NXD2 777 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 PCDH10Q9P2E7 1040 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 TEX264Q9Y6I9 313 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 M0R233 179 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 PCDH7O60245 1069 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 PSMA6P60900 246 aaKnown RBP12.08□□□□□ -0.48
CLCN4-203ENST00000421085 SLC3A1Q07837 685 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 LAPTM4AQ15012 233 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 KLHL26Q53HC5 615 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 PRPF38BQ5VTL8 546 aaKnown RBP12.08□□□□□ -0.48
CLCN4-203ENST00000421085 OR4F3Q6IEY1 312 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 ANKRD26P1Q6NSI1 321 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 KIAA1324Q6UXG2 1013 aaKnown RBP12.08□□□□□ -0.48
CLCN4-203ENST00000421085 DNAJB7Q7Z6W7 309 aaPredicted RBP12.08□□□□□ -0.48
CLCN4-203ENST00000421085 AMIGO1Q86WK6 493 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 SOCS4Q8WXH5 440 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 TNFRSF10DQ9UBN6 386 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 PCDHGB7Q9Y5F8 929 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 C12orf71A8MTZ7 269 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 GPR25O00155 361 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 DLGAP1O14490 977 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 CRISP3P54108 245 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 TUSC3Q13454 348 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 FAM46CQ5VWP2 391 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 HAGHLQ6PII5 290 aaPredicted RBP12.08□□□□□ -0.48
CLCN4-203ENST00000421085 OR5T3Q8NGG3 340 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 GEMIN6Q8WXD5 167 aaKnown RBP12.08□□□□□ -0.48
CLCN4-203ENST00000421085 RFT1Q96AA3 541 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 ZNF558Q96NG5 402 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 CCDC106Q9BWC9 280 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 CCSER2Q9H7U1 834 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 HCN2Q9UL51 889 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 OR6C75A6NL08 312 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 CREG1O75629 220 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 EIF2S3LQ2VIR3 472 aaKnown RBP12.08□□□□□ -0.48
CLCN4-203ENST00000421085 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.08□□□□□ -0.48
CLCN4-203ENST00000421085 MUS81Q96NY9 551 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 HNRNPABQ99729 332 aaKnown RBP12.08□□□□□ -0.48
CLCN4-203ENST00000421085 TMEM246Q9BRR3 403 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 USP29Q9HBJ7 922 aa12.08□□□□□ -0.48
CLCN4-203ENST00000421085 FCF1Q9Y324 198 aaKnown RBP12.08□□□□□ -0.48
CLCN4-203ENST00000421085 ERCC6L2Q5T890 1561 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 VNN1O95497 513 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 GRK6P43250 576 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 SULT2A1Q06520 285 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 LSAMPQ13449 338 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 AQP11Q8NBQ7 271 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 OR13C4Q8NGS5 318 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 ZBED6CLQ96FA7 236 aaPredicted RBP12.07□□□□□ -0.48
CLCN4-203ENST00000421085 PCED1BQ96HM7 432 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 MIPEPQ99797 713 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 FAM83DQ9H4H8 585 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 THUMPD1Q9NXG2 353 aaKnown RBP12.07□□□□□ -0.48
CLCN4-203ENST00000421085 ZNF510Q9Y2H8 683 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 NT5C1B-RDH14C9J2C7 533 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 CACNB4O00305 520 aaPredicted RBP12.07□□□□□ -0.48
CLCN4-203ENST00000421085 SNHG28P0DPA3 235 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 CHRM1P11229 460 aaPredicted RBP12.07□□□□□ -0.48
CLCN4-203ENST00000421085 EDNRAP25101 427 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 IL10RBQ08334 325 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 HSDL1Q3SXM5 330 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 KIAA1614Q5VZ46 1190 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 PHYKPLQ8IUZ5 450 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 FOXRED2Q8IWF2 684 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 OR5AK3PQ8NH89 298 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 OR2B2Q9GZK3 357 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 EXO5Q9H790 373 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 TMEM39AQ9NV64 488 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 C14orf119Q9NWQ9 140 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 CFAP97Q9P2B7 532 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 CHD1O14646 1710 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 SH3PXD2BA1X283 911 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 PRORSD1PA6NEY8 169 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 PLD2O14939 933 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 KMOO15229 486 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 FPR1P21462 350 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 PUM1Q14671 1186 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLCN4-203ENST00000421085 ZNF181Q2M3W8 571 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 XKR4Q5GH76 650 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 TREML1Q86YW5 311 aa12.07□□□□□ -0.48
CLCN4-203ENST00000421085 ATAD1Q8NBU5 361 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms