RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 SLC13A3Q8WWT9 602 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 NDRG1Q92597 394 aaKnown RBP6.84□□□□□ -1.31
TVP23C-202ENST00000419890 PROX1Q92786 737 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 RNF34Q969K3 372 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 TRIM63Q969Q1 353 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 FUBP1Q96AE4 644 aaKnown RBP6.84□□□□□ -1.31
TVP23C-202ENST00000419890 RHBDF1Q96CC6 855 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 LGALS12Q96DT0 336 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 PABPC5Q96DU9 382 aaKnown RBP6.84□□□□□ -1.31
TVP23C-202ENST00000419890 ZHX1-C8orf76Q96EF9 292 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 CCDC97Q96F63 343 aaPredicted RBP6.84□□□□□ -1.31
TVP23C-202ENST00000419890 PDLIM5Q96HC4 596 aaKnown RBP6.84□□□□□ -1.31
TVP23C-202ENST00000419890 PCED1BQ96HM7 432 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 SCLYQ96I15 445 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 SENP8Q96LD8 212 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 TEX37Q96LM6 180 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 TMEM74Q96NL1 305 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 NSUN5Q96P11 429 aaKnown RBP6.84□□□□□ -1.31
TVP23C-202ENST00000419890 SERPINB11Q96P15 392 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 AGAP4Q96P64 663 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 UCN2Q96RP3 112 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 C19orf43Q9BQ61 176 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 CLSTN3Q9BQT9 956 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 HERC2P3Q9BVR0 1158 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 RACGAP1Q9H0H5 632 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 SYNDIG1Q9H7V2 258 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 SIAEQ9HAT2 523 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 IL23AQ9NPF7 189 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 ACOT13Q9NPJ3 140 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.84□□□□□ -1.31
TVP23C-202ENST00000419890 MARCH4Q9P2E8 410 aaPredicted RBP6.84□□□□□ -1.31
TVP23C-202ENST00000419890 DKK3Q9UBP4 350 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 ADGRE2Q9UHX3 823 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 NDRG4Q9ULP0 352 aaKnown RBP6.84□□□□□ -1.31
TVP23C-202ENST00000419890 TRAPPC4Q9Y296 219 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 WBP11Q9Y2W2 641 aaKnown RBP6.84□□□□□ -1.31
TVP23C-202ENST00000419890 DGKBQ9Y6T7 804 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 PMF1-BGLAPU3KQ54 211 aa6.84□□□□□ -1.31
TVP23C-202ENST00000419890 CHD5Q8TDI0 1954 aa6.84□□□□□ -1.32
TVP23C-202ENST00000419890 LTBP2Q14767 1821 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 A0A096LPI6 279 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 PABPN1LA6NDY0 278 aaKnown RBP6.83□□□□□ -1.32
TVP23C-202ENST00000419890 A8MVJ9 347 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 EFCAB9A8MZ26 197 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 E9PAM4 449 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 SLC28A1O00337 649 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 CLDN5O00501 218 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 SOX1O00570 391 aaPredicted RBP6.83□□□□□ -1.32
TVP23C-202ENST00000419890 E2F3O00716 465 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 PRMT5O14744 637 aaPredicted RBP6.83□□□□□ -1.32
TVP23C-202ENST00000419890 WNT9AO14904 365 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 HAT1O14929 419 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 KMOO15229 486 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 IDH3BO43837 385 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 XYLBO75191 536 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 SEC22BO75396 215 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 ALX3O95076 343 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 KRT75O95678 551 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 OTCP00480 354 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 GOT2P00505 430 aaKnown RBP6.83□□□□□ -1.32
TVP23C-202ENST00000419890 MT-ND2P03891 347 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 SERPINF2P08697 491 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 USP17L7P0C7H9 530 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 TSPAN8P19075 237 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 AGXTP21549 392 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 PTX3P26022 381 aaPredicted RBP6.83□□□□□ -1.32
TVP23C-202ENST00000419890 CD6P30203 668 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 DNAJA1P31689 397 aaKnown RBP6.83□□□□□ -1.32
TVP23C-202ENST00000419890 S100A5P33763 92 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 PBX3P40426 434 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 RPS5P46782 204 aaKnown RBP6.83□□□□□ -1.32
TVP23C-202ENST00000419890 MASP1P48740 699 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 SCNN1GP51170 649 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 ARSDP51689 593 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 KPNA1P52294 538 aaPredicted RBP6.83□□□□□ -1.32
TVP23C-202ENST00000419890 LIMK1P53667 647 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 MAPK10P53779 464 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 YBEYP58557 167 aaPredicted RBP6.83□□□□□ -1.32
TVP23C-202ENST00000419890 IL5RAQ01344 420 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 IFITM2Q01629 132 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 BNC1Q01954 994 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 CHRNEQ04844 493 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 SOX4Q06945 474 aaPredicted RBP6.83□□□□□ -1.32
TVP23C-202ENST00000419890 ELP6Q0PNE2 266 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 ABRQ12979 859 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 RAPSNQ13702 412 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 MAD2L1BPQ15013 274 aaPredicted RBP6.83□□□□□ -1.32
TVP23C-202ENST00000419890 EIF4HQ15056 248 aaKnown RBP6.83□□□□□ -1.32
TVP23C-202ENST00000419890 FUT11Q495W5 492 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 SIRPB2Q5JXA9 342 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 TMEM240Q5SV17 173 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 UBXN11Q5T124 520 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 CPZQ66K79 652 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 ERICH5Q6P6B1 374 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 FAM171BQ6P995 826 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 Q6ZSR9 355 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 GPRIN1Q7Z2K8 1008 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 PIWIL3Q7Z3Z3 882 aaKnown RBP6.83□□□□□ -1.32
TVP23C-202ENST00000419890 PIM3Q86V86 326 aa6.83□□□□□ -1.32
TVP23C-202ENST00000419890 CHPFQ8IZ52 775 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms