RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 GPR21Q99679 349 aa15.81■□□□□ 0.12
LINC00404-201ENST00000418660 MIPEPQ99797 713 aa15.81■□□□□ 0.12
LINC00404-201ENST00000418660 ENAMQ9NRM1 1142 aa15.81■□□□□ 0.12
LINC00404-201ENST00000418660 GPN3Q9UHW5 284 aaPredicted RBP15.81■□□□□ 0.12
LINC00404-201ENST00000418660 PADI2Q9Y2J8 665 aa15.81■□□□□ 0.12
LINC00404-201ENST00000418660 GCN1Q92616 2671 aaKnown RBP15.8■□□□□ 0.12
LINC00404-201ENST00000418660 ZNF839A8K0R7 811 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 EIF3FO00303 357 aaPredicted RBP15.8■□□□□ 0.12
LINC00404-201ENST00000418660 SRPX2O60687 465 aaPredicted RBP15.8■□□□□ 0.12
LINC00404-201ENST00000418660 VPS26AO75436 327 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 KLF7O75840 302 aaPredicted RBP15.8■□□□□ 0.12
LINC00404-201ENST00000418660 CMPK1P30085 196 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 CUL1Q13616 776 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 NAA25Q14CX7 972 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 NKAIN1Q4KMZ8 207 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 FAM69BQ5VUD6 431 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 TCTN3Q6NUS6 607 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 UGT3A1Q6NUS8 523 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 HIBCHQ6NVY1 386 aaPredicted RBP15.8■□□□□ 0.12
LINC00404-201ENST00000418660 KIAA0408Q6ZU52 694 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 CNTN4Q8IWV2 1026 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 CD200R1Q8TD46 325 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 SMPDL3AQ92484 453 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 CERS2Q96G23 380 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 ZNF285Q96NJ3 590 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 PKP4Q99569 1192 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 SELENOSQ9BQE4 189 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 TRIM55Q9BYV6 548 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 IFT80Q9P2H3 777 aaPredicted RBP15.8■□□□□ 0.12
LINC00404-201ENST00000418660 ANAPC2Q9UJX6 822 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 TP53TG5Q9Y2B4 290 aa15.8■□□□□ 0.12
LINC00404-201ENST00000418660 ARGFXA6NJG6 315 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 GFYI3L273 518 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 FANCGO15287 622 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 TTI1O43156 1089 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 ZBTB14O43829 449 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 CTSVO60911 334 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 ALAS2P22557 587 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 ELK3P41970 407 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 SKIV2L2P42285 1042 aaKnown RBP15.79■□□□□ 0.12
LINC00404-201ENST00000418660 PNLIPRP1P54315 467 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 GRM7Q14831 915 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 YOD1Q5VVQ6 348 aaPredicted RBP15.79■□□□□ 0.12
LINC00404-201ENST00000418660 CPNE9Q8IYJ1 553 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 LRRC39Q96DD0 335 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 SNF8Q96H20 258 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 TRIM51Q9BSJ1 452 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 ACAT2Q9BWD1 397 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 ING2Q9H160 280 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 PLAC1Q9HBJ0 212 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 ACSS2Q9NR19 701 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 NDOR1Q9UHB4 597 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 TRMT6Q9UJA5 497 aaKnown RBP15.79■□□□□ 0.12
LINC00404-201ENST00000418660 SPTBP11277 2137 aa15.79■□□□□ 0.12
LINC00404-201ENST00000418660 A0A1B0GX78 115 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 FITM1A5D6W6 292 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 DNAJB5O75953 348 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 SEC31AO94979 1220 aaKnown RBP15.78■□□□□ 0.12
LINC00404-201ENST00000418660 SLC16A8O95907 504 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 ONECUT2O95948 504 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 AHSGP02765 367 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 GABRB3P28472 473 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 RPA3P35244 121 aaPredicted RBP15.78■□□□□ 0.12
LINC00404-201ENST00000418660 CARSP49589 748 aaKnown RBP15.78■□□□□ 0.12
LINC00404-201ENST00000418660 ITGA8P53708 1063 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 YBX1P67809 324 aaKnown RBP15.78■□□□□ 0.12
LINC00404-201ENST00000418660 SSPNQ14714 243 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 CPZQ66K79 652 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 LRRC8EQ6NSJ5 796 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 MRPL14Q6P1L8 145 aaKnown RBP15.78■□□□□ 0.12
LINC00404-201ENST00000418660 SUSD1Q6UWL2 747 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 TTLL10Q6ZVT0 673 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 RNF44Q7L0R7 432 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 PIWIL4Q7Z3Z4 852 aaKnown RBP15.78■□□□□ 0.12
LINC00404-201ENST00000418660 GALNT7Q86SF2 657 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 RAB43Q86YS6 212 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 SPNS2Q8IVW8 549 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 TTC29Q8NA56 475 aaPredicted RBP15.78■□□□□ 0.12
LINC00404-201ENST00000418660 ZNF480Q8WV37 535 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 PWWP2AQ96N64 755 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 NDNQ99608 321 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 DPH7Q9BTV6 452 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 CUTCQ9NTM9 273 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 TAS2R13Q9NYV9 303 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 ANKMY1Q9P2S6 941 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 ZC3H7BQ9UGR2 993 aaKnown RBP15.78■□□□□ 0.12
LINC00404-201ENST00000418660 CHMP2BQ9UQN3 213 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 PTRH2Q9Y3E5 179 aaKnown RBP15.78■□□□□ 0.12
LINC00404-201ENST00000418660 TEX264Q9Y6I9 313 aa15.78■□□□□ 0.12
LINC00404-201ENST00000418660 TLN1Q9Y490 2541 aaKnown RBP15.78■□□□□ 0.12
LINC00404-201ENST00000418660 SNRNP200O75643 2136 aaKnown RBP15.77■□□□□ 0.12
LINC00404-201ENST00000418660 A0A0J9YVX5 310 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 OR2A25A4D2G3 310 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 E7ENX8 843 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 K7EM74 188 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 DSCR3O14972 297 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 CCNDBP1O95273 360 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 SYF2O95926 243 aaKnown RBP15.77■□□□□ 0.12
LINC00404-201ENST00000418660 PIM1P11309 404 aaPredicted RBP15.77■□□□□ 0.12
LINC00404-201ENST00000418660 NR1D1P20393 614 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms