RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 MCOLN3Q8TDD5 553 aa17.96■□□□□ 0.47
PTCD3-204ENST00000418628 DCAKDQ8WVC6 231 aa17.96■□□□□ 0.47
PTCD3-204ENST00000418628 FCRL4Q96PJ5 515 aa17.96■□□□□ 0.47
PTCD3-204ENST00000418628 CTRCQ99895 268 aa17.96■□□□□ 0.47
PTCD3-204ENST00000418628 PDE7BQ9NP56 450 aa17.96■□□□□ 0.47
PTCD3-204ENST00000418628 SOHLH2Q9NX45 425 aa17.96■□□□□ 0.47
PTCD3-204ENST00000418628 FETUBQ9UGM5 382 aa17.96■□□□□ 0.47
PTCD3-204ENST00000418628 PILRAQ9UKJ1 303 aa17.96■□□□□ 0.47
PTCD3-204ENST00000418628 PCDHB11Q9Y5F2 797 aa17.96■□□□□ 0.47
PTCD3-204ENST00000418628 NPEPPSL1A6NEC2 478 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 CDC7O00311 574 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 HCRTR1O43613 425 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 TIAF1O95411 115 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 ALDOAP04075 364 aaKnown RBP17.95■□□□□ 0.46
PTCD3-204ENST00000418628 LIPCP11150 499 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 CD1DP15813 335 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 SLC26A3P40879 764 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 SLC12A2P55011 1212 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 TBPL1P62380 186 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 VSNL1P62760 191 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 YBX1P67809 324 aaKnown RBP17.95■□□□□ 0.46
PTCD3-204ENST00000418628 CDKL1Q00532 357 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 FOXM1Q08050 763 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 CLN3Q13286 438 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 BMPR2Q13873 1038 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 GPR19Q15760 415 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 ST3GAL2Q16842 350 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 WDR93Q6P2C0 686 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 CCDC91Q7Z6B0 441 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 ADAMTSL2Q86TH1 951 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 DNAJC22Q8N4W6 341 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 PPFIBP2Q8ND30 876 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 OR8K5Q8NH50 307 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 TCTN2Q96GX1 697 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 SGPP1Q9BX95 441 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 KLHL25Q9H0H3 589 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 SLC6A20Q9NP91 592 aa17.95■□□□□ 0.46
PTCD3-204ENST00000418628 IGKV1-8A0A0C4DH67 115 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 OR2A25A4D2G3 310 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 TARM1B6A8C7 271 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 CCDC166P0CW27 439 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 ZNF28P17035 718 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 CRABP2P29373 138 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 GMPRP36959 345 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 GRIA3P42263 894 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 DLG1Q12959 904 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 MAP7Q14244 749 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 TSNQ15631 228 aaKnown RBP17.94■□□□□ 0.46
PTCD3-204ENST00000418628 TMTC4Q5T4D3 741 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 AGTRAPQ6RW13 159 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 SUSD1Q6UWL2 747 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 ZFAND4Q86XD8 727 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 PPP1R3BQ86XI6 285 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 SYTL1Q8IYJ3 562 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 CENPLQ8N0S6 344 aaPredicted RBP17.94■□□□□ 0.46
PTCD3-204ENST00000418628 OR56A3Q8NH54 315 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 PTERQ96BW5 349 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 FBXL8Q96CD0 374 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 ZNF285Q96NJ3 590 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 ANKMY1Q9P2S6 941 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 RARRES3Q9UL19 164 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 OARD1Q9Y530 152 aa17.94■□□□□ 0.46
PTCD3-204ENST00000418628 STMND1H3BQB6 276 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 SYF2O95926 243 aaKnown RBP17.93■□□□□ 0.46
PTCD3-204ENST00000418628 INHBAP08476 426 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 GCGRP47871 477 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 ARL4DP49703 201 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 SERPINB9P50453 376 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 ATP6V0D1P61421 351 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 SLC29A2Q14542 456 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 SF1Q15637 639 aaKnown RBP17.93■□□□□ 0.46
PTCD3-204ENST00000418628 UAP1Q16222 522 aaPredicted RBP17.93■□□□□ 0.46
PTCD3-204ENST00000418628 MROH9Q5TGP6 573 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 ICE2Q659A1 982 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 ZNF425Q6IV72 752 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 FIGLAQ6QHK4 219 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 RNF44Q7L0R7 432 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 SPACA3Q8IXA5 215 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 OR1L3Q8NH93 324 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 KCNE4Q8WWG9 221 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 ZUFSPQ96AP4 578 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 MIPEPQ99797 713 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 DPH1Q9BZG8 443 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 CCDC177Q9NQR7 707 aaPredicted RBP17.93■□□□□ 0.46
PTCD3-204ENST00000418628 SNX15Q9NRS6 342 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 IGSF5Q9NSI5 407 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 TAC3Q9UHF0 121 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 KLHL20Q9Y2M5 609 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 SCN3AQ9NY46 2000 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 LOC400499M0QZD8 3231 aa17.93■□□□□ 0.46
PTCD3-204ENST00000418628 EXOC1LA0A1B0GW35 172 aa17.92■□□□□ 0.46
PTCD3-204ENST00000418628 NRP2O60462 931 aa17.92■□□□□ 0.46
PTCD3-204ENST00000418628 STK17BO94768 372 aa17.92■□□□□ 0.46
PTCD3-204ENST00000418628 CNTFP26441 200 aa17.92■□□□□ 0.46
PTCD3-204ENST00000418628 SERPINB8P50452 374 aa17.92■□□□□ 0.46
PTCD3-204ENST00000418628 PRDX1Q06830 199 aaKnown RBP17.92■□□□□ 0.46
PTCD3-204ENST00000418628 NAA25Q14CX7 972 aa17.92■□□□□ 0.46
PTCD3-204ENST00000418628 OR4D1Q15615 310 aa17.92■□□□□ 0.46
PTCD3-204ENST00000418628 PWWP2BQ6NUJ5 590 aa17.92■□□□□ 0.46
PTCD3-204ENST00000418628 ADGRD1Q6QNK2 874 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms