RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 SDC1P18827 310 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 TACR1P25103 407 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 CD70P32970 193 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 SERPINB10P48595 397 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 BMXP51813 675 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 SRSF11Q05519 484 aaKnown RBP11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 NOGQ13253 232 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 LAPTM4AQ15012 233 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 RGS21Q2M5E4 152 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ANKDD1AQ495B1 522 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 DGKKQ5KSL6 1271 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 OR2T5Q6IEZ7 315 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 NOXRED1Q6NXP6 359 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 EGFL6Q8IUX8 553 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 PIK3C3Q8NEB9 887 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 OR2T29Q8NH02 315 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 GLMNQ92990 594 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 FBXL8Q96CD0 374 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 MED8Q96G25 268 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 TPD52L3Q96J77 140 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 C19orf43Q9BQ61 176 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 FUNDC2Q9BWH2 189 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 REXO4Q9GZR2 422 aaKnown RBP11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 BRD9Q9H8M2 597 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 KLHL42Q9P2K6 505 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 MAGEB17A8MXT2 336 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 hCG_2039718K7EN88 272 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 EIF3FO00303 357 aaPredicted RBP11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 FABP3P05413 133 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 PSMB9P28065 219 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 AP1S2P56377 157 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 DGCR6Q14129 220 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 TBC1D25Q3MII6 688 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ERICH5Q6P6B1 374 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 RNF165Q6ZSG1 346 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ELMOD1Q8N336 334 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ASZ1Q8WWH4 475 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 APIPQ96GX9 242 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 EGLN2Q96KS0 407 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 MBOAT4Q96T53 435 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 BBS2Q9BXC9 721 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 PCDH12Q9NPG4 1184 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 FAIMQ9NVQ4 179 aa11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 PDP1Q9P0J1 537 aaPredicted RBP11.38□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 TRAV19A0A0A6YYK7 116 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ZBBXA8MT70 800 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ZNF99A8MXY4 864 aaPredicted RBP11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 XPNPEP2O43895 674 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 MTX2O75431 263 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 POP4O95707 220 aaKnown RBP11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 CCDC159P0C7I6 412 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ATP1B2P14415 290 aaPredicted RBP11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ENGP17813 658 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 DUOXA1Q1HG43 343 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 SLC44A4Q53GD3 710 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 LDLRAP1Q5SW96 308 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 LHX8Q68G74 356 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ANKRD34AQ69YU3 496 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 SLC22A15Q8IZD6 547 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 CMTM8Q8IZV2 173 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ZNF540Q8NDQ6 660 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 PJA1Q8NG27 643 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 CNIH3Q8TBE1 160 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 SGCDQ92629 289 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 TESCQ96BS2 214 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 MTERF1Q99551 399 aaKnown RBP11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 GPN2Q9H9Y4 310 aaPredicted RBP11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 HMG20AQ9NP66 347 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 SLC6A13Q9NSD5 602 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 H0Y858 1186 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 MAN1A2O60476 641 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 DNAJB5O75953 348 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 TRPC1P48995 793 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 CAP1Q01518 475 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 RAB33AQ14088 237 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 LRIF1Q5T3J3 769 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 PXYLP1Q8TE99 480 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 STARD8Q92502 1023 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ZNF334Q9HCZ1 680 aaPredicted RBP11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 TLR9Q9NR96 1032 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 KRT84Q9NSB2 600 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 GPRC5BQ9NZH0 403 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 DNMT3BQ9UBC3 853 aaKnown RBP11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 MAN2B2Q9Y2E5 1009 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 MGAT4DA6NG13 374 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 FAM20BO75063 409 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 SH3BGRLO75368 114 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ST13P50502 369 aaKnown RBP11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 GPNMBQ14956 572 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 TRIM16LQ309B1 348 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ZNF691Q5VV52 312 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 XAF1Q6GPH4 301 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 SHQ1Q6PI26 577 aaKnown RBP11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ADCK1Q86TW2 530 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 P3H2Q8IVL5 708 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 FIBINQ8TAL6 211 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 CLP1Q92989 425 aaKnown RBP11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 TMEM159Q96B96 161 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 TM9SF3Q9HD45 589 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms