RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 INTS10Q9NVR2 710 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 IL1RAPL1Q9NZN1 696 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 ANKMY1Q9P2S6 941 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 VPS4AQ9UN37 437 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 RUVBL2Q9Y230 463 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 FAM169AQ9Y6X4 670 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 RP1L1Q8IWN7 2480 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 PCSK5Q92824 1860 aa16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 A0A1W2PPV9 198 aa16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 UMODP07911 640 aa16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 MCM3P25205 808 aa16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 VARSP26640 1264 aaKnown RBP16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 THOC5Q13769 683 aaKnown RBP16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 CYP1B1Q16678 543 aa16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 JMJD6Q6NYC1 403 aaPredicted RBP16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 PPP1R32Q7Z5V6 425 aa16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 GALNT16Q8N428 558 aa16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 RBMXL3Q8N7X1 1067 aaKnown RBP16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 OR2L3Q8NG85 312 aa16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 OR2A1Q8NGT9 310 aa16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 OR9A1PQ8NGU1 263 aa16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 PNPLA2Q96AD5 504 aa16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 ZNF669Q96BR6 464 aaPredicted RBP16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 WDR54Q9H977 334 aa16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 ATP13A2Q9NQ11 1180 aa16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 SLAMF7Q9NQ25 335 aa16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 MAP4K5Q9Y4K4 846 aa16.85■□□□□ 0.29
PDLIM2-208ENST00000416159 CTAGE9A4FU28 777 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 FITM1A5D6W6 292 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 CTSVO60911 334 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 PSIP1O75475 530 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 PSMB5P28074 263 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 CMPK1P30085 196 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 SOX8P57073 446 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 VSX2P58304 361 aaPredicted RBP16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 MYBPC3Q14896 1274 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 KLHL38Q2WGJ6 581 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 TTLL9Q3SXZ7 439 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 ACSBG2Q5FVE4 666 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 WASHC2DQ5SRD0 308 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 CCDC137Q6PK04 289 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 NEK10Q6ZWH5 1172 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 FAM136AQ96C01 138 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 MS4A14Q96JA4 679 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 MFRPQ9BY79 579 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 SLC26A1Q9H2B4 701 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 FAM114A2Q9NRY5 505 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 KLHL42Q9P2K6 505 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 GALPQ9UBC7 116 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 TSR3Q9UJK0 312 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 NXT1Q9UKK6 140 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 PTPN13Q12923 2485 aa16.84■□□□□ 0.29
PDLIM2-208ENST00000416159 HECTD1Q9ULT8 2610 aa16.83■□□□□ 0.29
PDLIM2-208ENST00000416159 A0A0J9YVX5 310 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 KRT87PA6NCN2 255 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 ZNF839A8K0R7 811 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 ARHGEF33A8MVX0 844 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 AGPSO00116 658 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 USP1O94782 785 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 IPO13O94829 963 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 CATP04040 527 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 ALPPP05187 535 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 ERGP11308 486 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 ITGAXP20702 1163 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 MMP11P24347 488 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 HSD17B2P37059 387 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 SRSF1Q07955 248 aaKnown RBP eCLIP16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 RAPSNQ13702 412 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 FASTKQ14296 549 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 ARHGAP19Q14CB8 494 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 INPP5JQ15735 1006 aaPredicted RBP16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 NKG7Q16617 165 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 SLC6A19Q695T7 634 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 ZNF470Q6ECI4 717 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 RNF44Q7L0R7 432 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 LMNTD2Q8IXW0 634 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 GRK7Q8WTQ7 553 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 SMPDL3AQ92484 453 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 SERPINB12Q96P63 405 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 CCDC68Q9H2F9 335 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 NEU2Q9Y3R4 380 aa16.83■□□□□ 0.28
PDLIM2-208ENST00000416159 ESPL1Q14674 2120 aa16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 ZCWPW2A0A1B0GU75 182 aa16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 HYKKA2RU49 373 aa16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 OR2A25A4D2G3 310 aa16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 GOLGA8MH3BSY2 632 aa16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 MYO1CO00159 1063 aa16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 PGRMC1O00264 195 aaKnown RBP16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 CLCN7P51798 805 aa16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 FOXL2P58012 376 aa16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 FRMPD2BQ6IN97 320 aa16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 FBXO42Q6P3S6 717 aa16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 COX15Q7KZN9 410 aa16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 Q8NA96 180 aa16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 CALML6Q8TD86 181 aa16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 VPS50Q96JG6 964 aa16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 SPSB2Q99619 263 aa16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 ZFYVE21Q9BQ24 234 aa16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 TRIM56Q9BRZ2 755 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms