RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 FAAH2Q6GMR7 532 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 RABEPKQ7Z6M1 372 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 GALNT7Q86SF2 657 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 LRRTM3Q86VH5 581 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 COX18Q8N8Q8 333 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 SMYD1Q8NB12 490 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 ZNF527Q8NB42 609 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 BPIFB6Q8NFQ5 453 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 OR7A2PQ8NGA2 310 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 GIPC3Q8TF64 312 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 ADAM7Q9H2U9 754 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 AKTIPQ9H8T0 292 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 CD320Q9NPF0 282 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 HCN3Q9P1Z3 774 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 P2RX2Q9UBL9 471 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 LYVE1Q9Y5Y7 322 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 C2orf78A6NCI8 922 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 FAM189A1O60320 539 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 HLA-DQA2P01906 255 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 THRBP10828 461 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 ALAS2P22557 587 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 NRG3P56975 720 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 SIX1Q15475 284 aaPredicted RBP11.67□□□□□ -0.54
PTPRF-205ENST00000414879 DUOXA1Q1HG43 343 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 PTCHD3Q3KNS1 767 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 RBM20Q5T481 1227 aaKnown RBP11.67□□□□□ -0.54
PTPRF-205ENST00000414879 Q6ZVL8 140 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 SPPL2CQ8IUH8 684 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 ZZZ3Q8IYH5 903 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 MRPL43Q8N983 215 aaKnown RBP11.67□□□□□ -0.54
PTPRF-205ENST00000414879 FAM174AQ8TBP5 190 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 ADAMTS18Q8TE60 1221 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 ZNF317Q96PQ6 595 aaPredicted RBP11.67□□□□□ -0.54
PTPRF-205ENST00000414879 QSER1Q2KHR3 1735 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 A0A1W2PP18 115 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 TMCC2O75069 709 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 CCNB2O95067 398 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 S1PR4O95977 384 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 ABHD18Q0P651 414 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 FAM214AQ32MH5 1076 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 SNAP47Q5SQN1 464 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 S100ZQ8WXG8 99 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 MIEF2Q96C03 454 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 SPATA9Q9BWV2 254 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 NUAK2Q9H093 628 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 MAT2BQ9NZL9 334 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 ATXN10Q9UBB4 475 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 C19orf25Q9UFG5 118 aaPredicted RBP11.67□□□□□ -0.54
PTPRF-205ENST00000414879 RSL24D1Q9UHA3 163 aaKnown RBP11.67□□□□□ -0.54
PTPRF-205ENST00000414879 COL4A1P02462 1669 aa11.67□□□□□ -0.54
PTPRF-205ENST00000414879 TNS1Q9HBL0 1735 aaKnown RBP11.66□□□□□ -0.54
PTPRF-205ENST00000414879 KLF8O95600 359 aaPredicted RBP11.66□□□□□ -0.54
PTPRF-205ENST00000414879 RPS9P46781 194 aaKnown RBP11.66□□□□□ -0.54
PTPRF-205ENST00000414879 ZNF630Q2M218 657 aaPredicted RBP11.66□□□□□ -0.54
PTPRF-205ENST00000414879 PKDCCQ504Y2 493 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 MANEALQ5VSG8 457 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 RINLQ6ZS11 566 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 CXXC5Q7LFL8 322 aaKnown RBP11.66□□□□□ -0.54
PTPRF-205ENST00000414879 AMIGO2Q86SJ2 522 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 FAM46DQ8NEK8 389 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 OR4F6Q8NGB9 312 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 EXO5Q9H790 373 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 TMLHEQ9NVH6 421 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 SLC22A14Q9Y267 594 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 MAP4K5Q9Y4K4 846 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 CDC7O00311 574 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 EDIL3O43854 480 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 RFPL1O75677 317 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 ALPPP05187 535 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 CHRNGP07510 517 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 CDH1P12830 882 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 MLLT3P42568 568 aaPredicted RBP11.66□□□□□ -0.54
PTPRF-205ENST00000414879 WNT7BP56706 349 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 SLC10A2Q12908 348 aaPredicted RBP11.66□□□□□ -0.54
PTPRF-205ENST00000414879 ITGADQ13349 1161 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 ARMC4Q5T2S8 1044 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 LCN1P1Q5VSP4 162 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 ZNF852Q6ZMS4 543 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 OR5K1Q8NHB7 308 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 MAPK15Q8TD08 544 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 CGREF1Q99674 301 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 TAPBPLQ9BX59 468 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 YTHDF1Q9BYJ9 559 aaKnown RBP11.66□□□□□ -0.54
PTPRF-205ENST00000414879 PHIPQ8WWQ0 1821 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 IQCF5A8MTL0 148 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 C2orf74A8MZ97 194 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 MATN4O95460 622 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 GSTM3P21266 225 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 GSTM2P28161 218 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 IL12BP29460 328 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 ZNF252P-AS1Q0IIN9 211 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 SLC13A2Q13183 592 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 PCLAFQ15004 111 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 MINDY4Q4G0A6 757 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 MTERF1Q99551 399 aaKnown RBP11.66□□□□□ -0.54
PTPRF-205ENST00000414879 PDP1Q9P0J1 537 aaPredicted RBP11.66□□□□□ -0.54
PTPRF-205ENST00000414879 OGDHLQ9ULD0 1010 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 FDXRP22570 491 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 HOXA9P31269 272 aa11.66□□□□□ -0.54
PTPRF-205ENST00000414879 CTSKP43235 329 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms