RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 GRXCR1A8MXD5 290 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 F8VP50 259 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 PAPSS1O43252 624 aaPredicted RBP9.16□□□□□ -0.94
SNHG3-201ENST00000413987 HTRA2O43464 458 aaPredicted RBP9.16□□□□□ -0.94
SNHG3-201ENST00000413987 CLN5O75503 358 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 GCATO75600 419 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 CTAG2O75638 210 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 PCSK1P29120 753 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 LHX1P48742 406 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 EIF2B2P49770 351 aaKnown RBP9.16□□□□□ -0.94
SNHG3-201ENST00000413987 NUDT2P50583 147 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 NDST2P52849 883 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 ABCE1P61221 599 aaKnown RBP9.16□□□□□ -0.94
SNHG3-201ENST00000413987 DYNLT1P63172 113 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 ADIGQ0VDE8 80 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 IRF3Q14653 427 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 ZMYND11Q15326 602 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 EXOSC6Q5RKV6 272 aaKnown RBP9.16□□□□□ -0.94
SNHG3-201ENST00000413987 FAM102AQ5T9C2 384 aaPredicted RBP9.16□□□□□ -0.94
SNHG3-201ENST00000413987 RIPPLY2Q5TAB7 128 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 NDUFAF5Q5TEU4 345 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 OR6B2Q6IFH4 312 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 NEPROQ6NW34 567 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 CYS1Q717R9 158 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 PIGZQ86VD9 579 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 DSELQ8IZU8 1212 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 LILRA2Q8N149 483 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 TMEM86AQ8N2M4 240 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 BHLHE22Q8NFJ8 381 aaPredicted RBP9.16□□□□□ -0.94
SNHG3-201ENST00000413987 CALML6Q8TD86 181 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 TRUB1Q8WWH5 349 aaKnown RBP9.16□□□□□ -0.94
SNHG3-201ENST00000413987 ZNF689Q96CS4 500 aaPredicted RBP9.16□□□□□ -0.94
SNHG3-201ENST00000413987 CDRT15Q96T59 188 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 DOK1Q99704 481 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 FERMT1Q9BQL6 677 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 FAM83CQ9BQN1 747 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 TMEM79Q9BSE2 394 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 ANKRD60Q9BZ19 345 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 SHCBP1LQ9BZQ2 653 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 LTB4R2Q9NPC1 389 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 PRDM8Q9NQV8 689 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 OLAHQ9NV23 265 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 CNIH4Q9P003 139 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 TMEM9Q9P0T7 183 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 SPASTQ9UBP0 616 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 ERVK-19Q9WJR5 959 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 RUVBL1Q9Y265 456 aaKnown RBP9.16□□□□□ -0.94
SNHG3-201ENST00000413987 EMC9Q9Y3B6 208 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 FAM159BA6NKW6 160 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 CXorf49A8MYA2 514 aaPredicted RBP9.16□□□□□ -0.94
SNHG3-201ENST00000413987 KPNA4O00629 521 aaPredicted RBP9.16□□□□□ -0.94
SNHG3-201ENST00000413987 ZNF195O14628 629 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 AIM2O14862 343 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 LYPLA1O75608 230 aaPredicted RBP9.16□□□□□ -0.94
SNHG3-201ENST00000413987 SULT1C4O75897 302 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 ACTL6BO94805 426 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 ARHGEF15O94989 841 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 FGBP02675 491 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 FUCA1P04066 466 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 INHBBP09529 407 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 CKMT2P17540 419 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 KDELR1P24390 212 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 EPHA8P29322 1005 aaPredicted RBP9.16□□□□□ -0.94
SNHG3-201ENST00000413987 NUMBP49757 651 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 MMP16P51512 607 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 RPP30P78346 268 aaKnown RBP9.16□□□□□ -0.94
SNHG3-201ENST00000413987 BST2Q10589 180 aaKnown RBP9.16□□□□□ -0.94
SNHG3-201ENST00000413987 RAPSNQ13702 412 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 FGL2Q14314 439 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 RFTN1Q14699 578 aaPredicted RBP9.16□□□□□ -0.94
SNHG3-201ENST00000413987 HERC3Q15034 1050 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 CDO1Q16878 200 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 C3orf36Q3SXR2 165 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 C9orf50Q5SZB4 431 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 SLC35F1Q5T1Q4 408 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 TXNRD3NBQ6F5E7 133 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 EPGNQ6UW88 154 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 C4orf22Q6V702 233 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 MAVSQ7Z434 540 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 ATAD1Q8NBU5 361 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 TBC1D15Q8TC07 691 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 ST7LQ8TDW4 575 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 PKMYT1Q99640 499 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 SLC25A18Q9H1K4 315 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 CRISPLD1Q9H336 500 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 SCPEP1Q9HB40 452 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 POPDC2Q9HBU9 364 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 PNPOQ9NVS9 261 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 TRNAU1APQ9NX07 287 aaKnown RBP9.16□□□□□ -0.94
SNHG3-201ENST00000413987 TAS2R10Q9NYW0 307 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 CDH9Q9ULB4 789 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 HEMK1Q9Y5R4 338 aaPredicted RBP9.16□□□□□ -0.94
SNHG3-201ENST00000413987 C5orf51A6NDU8 294 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 SNAP91O60641 907 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 PLIN3O60664 434 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 KRT3P12035 628 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 PRKCAP17252 672 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 XRCC1P18887 633 aaPredicted RBP9.15□□□□□ -0.94
SNHG3-201ENST00000413987 PGFP49763 221 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 HK2P52789 917 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms