RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 ARMC3Q5W041 872 aa9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 ZNF385CQ66K41 422 aaPredicted RBP9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 FRMPD2BQ6IN97 320 aa9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 RHBDD2Q6NTF9 364 aa9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 HIBCHQ6NVY1 386 aaPredicted RBP9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 UBE2R2Q712K3 238 aaPredicted RBP9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 PIWIL4Q7Z3Z4 852 aaKnown RBP9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 PDIK1LQ8N165 341 aa9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 DTWD1Q8N5C7 304 aa9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 C2CD4AQ8NCU7 369 aaPredicted RBP9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 OR2L3Q8NG85 312 aa9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 CD200R1Q8TD46 325 aa9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 EEF1AKMT1Q8WVE0 214 aa9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 SLCO2A1Q92959 643 aa9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 ALKBH8Q96BT7 664 aaKnown RBP9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 SELENOSQ9BQE4 189 aa9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 RAB11FIP5Q9BXF6 653 aa9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 DPH5Q9H2P9 285 aa9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 PLAC1Q9HBJ0 212 aa9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 ZC3H7BQ9UGR2 993 aaKnown RBP9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 TP53TG5Q9Y2B4 290 aa9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 PTRH2Q9Y3E5 179 aaKnown RBP9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 MRFAP1Q9Y605 127 aa9.77□□□□□ -0.85
NCKIPSD-202ENST00000413374 ATMQ13315 3056 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 LOC105369274A0A096LPK9 316 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 LOC102723532A0A0G2JNH3 316 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 MKRN2OSH3BPM6 223 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 SUV39H1O43463 412 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 ZBTB14O43829 449 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 RFPL1O75677 317 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 TTC4O95801 387 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 MPC1LP0DKB6 136 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 SAT1P21673 171 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 ATP5DP30049 168 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 CMPK1P30085 196 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 PNLIPRP1P54315 467 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 CDKN2DP55273 166 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 TIAL1Q01085 375 aaKnown RBP eCLIP9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 C2orf54Q08AI8 447 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 PDIA2Q13087 525 aaKnown RBP9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 RAPSNQ13702 412 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 MORF4L2Q15014 288 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 NCF4Q15080 339 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 NKAIN1Q4KMZ8 207 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 LACTB2Q53H82 288 aaPredicted RBP9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 WASHC2DQ5SRD0 308 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 TEDDM1Q5T9Z0 273 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 THEMIS2Q5TEJ8 643 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 FBXO42Q6P3S6 717 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 TLDC1Q6P9B6 456 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 TRMT10BQ6PF06 316 aaKnown RBP9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 PAQR3Q6TCH7 311 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 CAPN12Q6ZSI9 719 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 SHISA6Q6ZSJ9 500 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 SYDE1Q6ZW31 735 aaPredicted RBP9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 LMNTD2Q8IXW0 634 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 OR4N4Q8N0Y3 316 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 GPATCH11Q8N954 259 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 ASB11Q8WXH4 323 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 THAP4Q8WY91 577 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 SMPDL3AQ92484 453 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 KCNJ9Q92806 393 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 ZUFSPQ96AP4 578 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 CERS2Q96G23 380 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 SNF8Q96H20 258 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 RUNDC3BQ96NL0 473 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 GBP5Q96PP8 586 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 WDR83Q9BRX9 315 aaKnown RBP9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 DPH7Q9BTV6 452 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 CHRNA10Q9GZZ6 450 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 ING2Q9H160 280 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 SLC6A20Q9NP91 592 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 MRPS30Q9NP92 439 aaKnown RBP9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 ACSS2Q9NR19 701 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 FAM114A2Q9NRY5 505 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 CUTCQ9NTM9 273 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 SPATA7Q9P0W8 599 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 TAC3Q9UHF0 121 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 TRMT6Q9UJA5 497 aaKnown RBP9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 ADAMTS6Q9UKP5 1117 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 MAU2Q9Y6X3 613 aa9.76□□□□□ -0.85
NCKIPSD-202ENST00000413374 TARM1B6A8C7 271 aa9.75□□□□□ -0.85
NCKIPSD-202ENST00000413374 CCDC188H7C350 402 aa9.75□□□□□ -0.85
NCKIPSD-202ENST00000413374 MYO1CO00159 1063 aa9.75□□□□□ -0.85
NCKIPSD-202ENST00000413374 CNOT3O75175 753 aaKnown RBP9.75□□□□□ -0.85
NCKIPSD-202ENST00000413374 KLF7O75840 302 aaPredicted RBP9.75□□□□□ -0.85
NCKIPSD-202ENST00000413374 PIAS1O75925 651 aa9.75□□□□□ -0.85
NCKIPSD-202ENST00000413374 SEC31AO94979 1220 aaKnown RBP9.75□□□□□ -0.85
NCKIPSD-202ENST00000413374 SLC16A8O95907 504 aa9.75□□□□□ -0.85
NCKIPSD-202ENST00000413374 RECKO95980 971 aa9.75□□□□□ -0.85
NCKIPSD-202ENST00000413374 STATHP02808 62 aa9.75□□□□□ -0.85
NCKIPSD-202ENST00000413374 PDGFAP04085 211 aa9.75□□□□□ -0.85
NCKIPSD-202ENST00000413374 RPL21P46778 160 aaKnown RBP9.75□□□□□ -0.85
NCKIPSD-202ENST00000413374 OR1D4P47884 311 aa9.75□□□□□ -0.85
NCKIPSD-202ENST00000413374 PMS2P54278 862 aa9.75□□□□□ -0.85
NCKIPSD-202ENST00000413374 ARL4CP56559 192 aa9.75□□□□□ -0.85
NCKIPSD-202ENST00000413374 ATP1A4Q13733 1029 aa9.75□□□□□ -0.85
NCKIPSD-202ENST00000413374 FASTKD3Q14CZ7 662 aaKnown RBP9.75□□□□□ -0.85
NCKIPSD-202ENST00000413374 HIF1AQ16665 826 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms