RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 SERINC5Q86VE9 423 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 CRLF3Q8IUI8 442 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 PGAM4Q8N0Y7 254 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 STPG2Q8N412 459 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 CERS5Q8N5B7 392 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 TRAM1L1Q8N609 369 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 EFCAB3Q8N7B9 438 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 YIPF7Q8N8F6 280 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 BHLHE22Q8NFJ8 381 aaPredicted RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 DYNC2LI1Q8TCX1 351 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 AP2M1Q96CW1 435 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 C5orf34Q96MH7 638 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 LRFN5Q96NI6 719 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 POP1Q99575 1024 aaKnown RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 EBF4Q9BQW3 602 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 SLIRPQ9GZT3 109 aaKnown RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 ELOVL2Q9NXB9 296 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 XPR1Q9UBH6 696 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 GPR34Q9UPC5 381 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 KIAA1024Q9UPX6 916 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 hCG_1807616A0A1W2PRN6 198 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 GSAPA4D1B5 854 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 A8MXK9 166 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 PDXKO00764 312 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 TMEM63AO94886 807 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 ALDH1A1P00352 501 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 USP17L8P0C7I0 530 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 HTR1BP28222 390 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 GTF2E2P29084 291 aaKnown RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 RPS5P46782 204 aaKnown RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 CSNK1DP48730 415 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 CCR5P51681 352 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 NUDT6P53370 316 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 MADCAM1Q13477 382 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 SCARF1Q14162 830 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 EMC2Q15006 297 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 SPOUT1Q5T280 376 aaKnown RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 TEDDM1Q5T9Z0 273 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 CES4AQ5XG92 561 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 RAP1GAP2Q684P5 730 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 XRRA1Q6P2D8 792 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 TIFABQ6ZNK6 161 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 USP30Q70CQ3 517 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 CXXC5Q7LFL8 322 aaKnown RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 UBR7Q8N806 425 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 WDSUB1Q8N9V3 476 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 MOSPD2Q8NHP6 518 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 BBS10Q8TAM1 723 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 RPL3LQ92901 407 aaKnown RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 NXNL1Q96CM4 212 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 SLC25A36Q96CQ1 311 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 PABPC5Q96DU9 382 aaKnown RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 KLF6Q99612 283 aaPredicted RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 POLDIP3Q9BY77 421 aaKnown RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 GAREM1Q9H706 876 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 IL1RAPQ9NPH3 570 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 SERINC1Q9NRX5 453 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 DPP3Q9NY33 737 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 ERAP1Q9NZ08 941 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 GHRLQ9UBU3 117 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 KRBOX1C9JBD0 128 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 E7ENX8 843 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 TRAF5O00463 557 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 PDE9AO76083 593 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 NXPH2O95156 264 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 GSRP00390 522 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 IFNB1P01574 187 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 C1QAP02745 245 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 ANXA1P04083 346 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 TXNP10599 105 aaKnown RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 CYP19A1P11511 503 aaPredicted RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 ACVR2AP27037 513 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 SLC7A1P30825 629 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 AQP5P55064 265 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 STX4Q12846 297 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 GPR17Q13304 367 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 CHRNA6Q15825 494 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 HSDL1Q3SXM5 330 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 TMEM236Q5W0B7 351 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 ETFRF1Q6IPR1 90 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 SZRD1Q7Z422 152 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 DEFB107AQ8IZN7 70 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 UBE2J2Q8N2K1 259 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 NETO2Q8NC67 525 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 TRMT10AQ8TBZ6 339 aaKnown RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 AKT1S1Q96B36 256 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 ASB9Q96DX5 294 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 SIGLEC10Q96LC7 697 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 NEDD4LQ96PU5 975 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 FAM129BQ96TA1 746 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 PAFAH2Q99487 392 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 KCNJ15Q99712 375 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 AGPAT1Q99943 283 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 CRB3Q9BUF7 120 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 NECTIN3Q9NQS3 549 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 CHST7Q9NS84 486 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 TEX10Q9NXF1 929 aaPredicted RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 KLHL21Q9UJP4 597 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 USP18Q9UMW8 372 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 ABCG2Q9UNQ0 655 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms