RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 IWS1Q96ST2 819 aa2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 SYT15Q9BQS2 421 aa2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 DESI2Q9BSY9 194 aa2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 HAUS8Q9BT25 410 aa2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 POLR3CQ9BUI4 534 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCDC28BQ9BUN5 200 aa2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 FAM192AQ9GZU8 254 aa2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 DENND2DQ9H6A0 471 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 PPP1R3EQ9H7J1 279 aa2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 EPB41L5Q9HCM4 733 aa2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 MMP25Q9NPA2 562 aa2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 GDF3Q9NR23 364 aa2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZFP57Q9NU63 452 aa2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 ACSS1Q9NUB1 689 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 PANK4Q9NVE7 773 aa2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 GIMAP2Q9UG22 337 aa2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 ACSL5Q9ULC5 683 aa2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 TTC7AQ9ULT0 858 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 C2CD2Q9Y426 696 aa2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZNF711Q9Y462 761 aa2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 L3MBTL1Q9Y468 752 aa2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 MAGED1Q9Y5V3 778 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 DEPDC5O75140 1603 aa2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 NEXMIFQ5QGS0 1516 aa2.37□□□□□ -2.03
HMGB3P2-201ENST00000411913 RFX7Q2KHR2 1363 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 MED23Q9ULK4 1368 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 ERCC6L2Q5T890 1561 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 CRB1P82279 1406 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 MROH1Q8NDA8 1641 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 hCG_1809904A0A1W2PP81 198 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 A0A1W2PPE2 198 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 A0A1W2PR64 198 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 LNP1A1A4G5 178 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 LRRD1A4D1F6 860 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 J3KR12 359 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 M0QZ24 198 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 TIMM23O14925 209 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 WDR46O15213 610 aaKnown RBP2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 ECE2O60344 883 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZIC3O60481 467 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 JAK2O60674 1132 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 SMIM24O75264 130 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 CH25HO95992 272 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 OAS1P00973 400 aaKnown RBP2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 GYPCP04921 128 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 ICAM1P05362 532 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 GSTA2P09210 222 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 G6PDP11413 515 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 FGF5P12034 268 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 FDPSP14324 419 aaKnown RBP2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 MMP9P14780 707 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 NQO1P15559 274 aaKnown RBP2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 ACADSP16219 412 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 CYP11B2P19099 503 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 NR1D1P20393 614 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 SP100P23497 879 aaPredicted RBP2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 CASP14P31944 242 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 STX2P32856 288 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 HSPA9P38646 679 aaKnown RBP2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 RPL3P39023 403 aaKnown RBP2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 EIF2S3P41091 472 aaKnown RBP2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 MSH2P43246 934 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 FASLGP48023 281 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 TRPC1P48995 793 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 LIG4P49917 911 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 SUOXP51687 545 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 NR0B1P51843 470 aaKnown RBP2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 NCALDP61601 193 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 CSNK2A1P68400 391 aaPredicted RBP2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 POU5F1Q01860 360 aaKnown RBP2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 PLOD1Q02809 727 aaPredicted RBP2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 CKAP4Q07065 602 aaKnown RBP2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 GRAPQ13588 217 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 PSMD6Q15008 389 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 EFNB3Q15768 340 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 EIF2S3LQ2VIR3 472 aaKnown RBP2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 TCP11X2Q5H9J9 407 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 SPECC1Q5M775 1068 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 ANKRD20A2Q5SQ80 823 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 ERMARDQ5T6L9 678 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 ANKRD20A1Q5TYW2 823 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 AGBL2Q5U5Z8 902 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 ANKRD20A3Q5VUR7 823 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 FRG2Q64ET8 278 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 TMEM198Q66K66 360 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 IRGCQ6NXR0 463 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 C19orf48Q6RUI8 117 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 SUSD1Q6UWL2 747 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 B3GNT6Q6ZMB0 384 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZNF497Q6ZNH5 498 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCDC80Q76M96 950 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZC3HC1Q86WB0 502 aaKnown RBP2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 FAM114A1Q8IWE2 563 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 SCYL3Q8IZE3 742 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 MYOCDQ8IZQ8 938 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 DSELQ8IZU8 1212 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 ARFGAP2Q8N6H7 521 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 GBP7Q8N8V2 638 aaPredicted RBP2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 CNBD1Q8NA66 436 aa2.36□□□□□ -2.03
HMGB3P2-201ENST00000411913 POGLUT1Q8NBL1 392 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms