RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 MAP2K7O14733 419 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 RASGRF2O14827 1237 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 PRICKLE3O43900 615 aaPredicted RBP13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 CTSVO60911 334 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 MED26O95402 600 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 GAS8O95995 478 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 APOA4P06727 396 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 ZGLP1P0C6A0 271 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 CYLC1P35663 651 aaPredicted RBP13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 ARG2P78540 354 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 CDH17Q12864 832 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 FASTKD1Q53R41 847 aaKnown RBP13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 TSTD2Q5T7W7 516 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 FRMPD2BQ6IN97 320 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 TTC23LQ6PF05 361 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 AFTPHQ6ULP2 937 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 NLRP9Q7RTR0 991 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 KBTBD2Q8IY47 623 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 KRT222Q8N1A0 295 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 OR6P1Q8NGX9 317 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 OR4L1Q8NH43 312 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 STT3BQ8TCJ2 826 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 LKAAEAR1Q8TD35 194 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 RELTQ969Z4 430 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 MIEF2Q96C03 454 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 C8orf44Q96CB5 159 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 CALR3Q96L12 384 aaKnown RBP13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 TMEM121Q9BTD3 319 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 ENAMQ9NRM1 1142 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 PLA2G3Q9NZ20 509 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 ZNF282Q9UDV7 671 aaPredicted RBP13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 ZC3H7BQ9UGR2 993 aaKnown RBP13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 C3orf18Q9UK00 162 aa13.61□□□□□ -0.23
HLA-DQB2-229ENST00000411527 LOC105369274A0A096LPK9 316 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 LOC102723532A0A0G2JNH3 316 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 A0A0J9YVX5 310 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 DYTNA2CJ06 578 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 HEATR9A2RTY3 570 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 FKBP9O95302 570 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 EIF2S1P05198 315 aaKnown RBP13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 AOAHP28039 575 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 PPARGP37231 505 aaPredicted RBP13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 KCNK10P57789 538 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 SEMA3AQ14563 771 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 VWA2Q5GFL6 755 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 ATG9BQ674R7 924 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 ZNF324BQ6AW86 544 aaPredicted RBP13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 ZNF534Q76KX8 674 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 OR4N4Q8N0Y3 316 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 RNF214Q8ND24 703 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 RAD51AP1Q96B01 352 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 ZNF778Q96MU6 729 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 TAAR6Q96RI8 345 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 MIPEPQ99797 713 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 TRIM56Q9BRZ2 755 aaKnown RBP13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 RAB11FIP5Q9BXF6 653 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 PTGFRNQ9P2B2 879 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 STOX2Q9P2F5 926 aaPredicted RBP13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 FAM169AQ9Y6X4 670 aa13.6□□□□□ -0.23
HLA-DQB2-229ENST00000411527 NSG1A0A0A6YYJ2 146 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 PCDH17O14917 1159 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 USP1O94782 785 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 SLCO2B1O94956 709 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 PRR35P0CG20 571 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 ADRA1DP25100 572 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 PSMB5P28074 263 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 GRNP28799 593 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 TNFSF10P50591 281 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 TDGF1P3P51864 188 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 PRAMEP78395 509 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 ART3Q13508 389 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 TMED2Q15363 201 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 PRMT9Q6P2P2 845 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 GFRALQ6UXV0 394 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 PPP1R21Q6ZMI0 780 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 NDUFAF7Q7L592 441 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 LDB1Q86U70 411 aaPredicted RBP13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 LAPTM4BQ86VI4 370 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 RAB42Q8N4Z0 105 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 GSDMBQ8TAX9 411 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 SLC35B2Q8TB61 432 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 BRIX1Q8TDN6 353 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 PSMF1Q92530 271 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 NR4A3Q92570 626 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 ANAPC5Q9UJX4 755 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 RIMKLBQ9ULI2 386 aa13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 TTC7AQ9ULT0 858 aaPredicted RBP13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 R3HDM2Q9Y2K5 976 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 EPN1Q9Y6I3 576 aaPredicted RBP13.59□□□□□ -0.23
HLA-DQB2-229ENST00000411527 CSMD1Q96PZ7 3565 aa13.58□□□□□ -0.23
HLA-DQB2-229ENST00000411527 TRAV17A0A0B4J275 112 aa13.58□□□□□ -0.24
HLA-DQB2-229ENST00000411527 TRGV8A0A0C4DH27 118 aa13.58□□□□□ -0.24
HLA-DQB2-229ENST00000411527 ERI2A8K979 691 aaKnown RBP13.58□□□□□ -0.24
HLA-DQB2-229ENST00000411527 NRP2O60462 931 aa13.58□□□□□ -0.24
HLA-DQB2-229ENST00000411527 F10P00742 488 aa13.58□□□□□ -0.24
HLA-DQB2-229ENST00000411527 UQCRHP07919 91 aa13.58□□□□□ -0.24
HLA-DQB2-229ENST00000411527 COX6A1P12074 109 aa13.58□□□□□ -0.24
HLA-DQB2-229ENST00000411527 FBLP22087 321 aaKnown RBP13.58□□□□□ -0.24
HLA-DQB2-229ENST00000411527 CXCR2P25025 360 aa13.58□□□□□ -0.24
HLA-DQB2-229ENST00000411527 SOX11P35716 441 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms