RNA–Protein interactions for RNA: ENST00000411463.2

R3HCC1-202, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene R3HCC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-202ENST00000411463 PHBP35232 272 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 RPA3P35244 121 aaPredicted RBP22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 GRIA3P42263 894 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 GABRA4P48169 554 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 ITGA1P56199 1179 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 NAB1Q13506 487 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 ZNF460Q14592 562 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 DEFB110Q30KQ9 67 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 GRTP1Q5TC63 336 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 FIGLAQ6QHK4 219 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 CEP97Q8IW35 865 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 DNAJC22Q8N4W6 341 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 NKAPQ8N5F7 415 aaKnown RBP22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 PPFIBP2Q8ND30 876 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 HIST1H2AHQ96KK5 128 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 CCDC138Q96M89 665 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 HIST1H2AJQ99878 128 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 RHOXF2Q9BQY4 288 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 H2AFJQ9BTM1 129 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 ACAT2Q9BWD1 397 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 POPDC3Q9HBV1 291 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 PCDHB3Q9Y5E6 796 aa22.66■■□□□ 1.22
R3HCC1-202ENST00000411463 TARM1B6A8C7 271 aa22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 K7ENP7 123 aa22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 HCRTR1O43613 425 aa22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 CPNE3O75131 537 aaKnown RBP22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 IMPA1P29218 277 aa22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 CMPK1P30085 196 aa22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 SPRP35270 261 aaPredicted RBP22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 STAT5AP42229 794 aa22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 USP10Q14694 798 aaKnown RBP22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 PHKG1Q16816 387 aa22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 ARHGAP40Q5TG30 622 aa22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 PRAMEF17Q5VTA0 474 aa22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 FCRL6Q6DN72 434 aa22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 INO80CQ6PI98 192 aaPredicted RBP22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 GPR155Q7Z3F1 870 aa22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 GPR135Q8IZ08 494 aa22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 KIAA1143Q96AT1 154 aaPredicted RBP22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 TSPAN17Q96FV3 270 aa22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 GPR22Q99680 433 aa22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 CAB39LQ9H9S4 337 aa22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 GPAMQ9HCL2 828 aa22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 PADI1Q9ULC6 663 aa22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 PLCL2Q9UPR0 1127 aa22.65■■□□□ 1.22
R3HCC1-202ENST00000411463 LOC101059948A0A1B0GTJ6 334 aa22.64■■□□□ 1.21
R3HCC1-202ENST00000411463 E7EQ34 232 aa22.64■■□□□ 1.21
R3HCC1-202ENST00000411463 FAM155BO75949 473 aa22.64■■□□□ 1.21
R3HCC1-202ENST00000411463 LIFP15018 202 aa22.64■■□□□ 1.21
R3HCC1-202ENST00000411463 LRRC56Q8IYG6 542 aaPredicted RBP22.64■■□□□ 1.21
R3HCC1-202ENST00000411463 SNRNP27Q8WVK2 155 aaKnown RBP22.64■■□□□ 1.21
R3HCC1-202ENST00000411463 ANKRD7Q92527 254 aa22.64■■□□□ 1.21
R3HCC1-202ENST00000411463 TRIM54Q9BYV2 358 aa22.64■■□□□ 1.21
R3HCC1-202ENST00000411463 CDC42EP4Q9H3Q1 356 aaKnown RBP22.64■■□□□ 1.21
R3HCC1-202ENST00000411463 GPN2Q9H9Y4 310 aaPredicted RBP22.64■■□□□ 1.21
R3HCC1-202ENST00000411463 STOX2Q9P2F5 926 aaPredicted RBP22.64■■□□□ 1.21
R3HCC1-202ENST00000411463 TAC3Q9UHF0 121 aa22.64■■□□□ 1.21
R3HCC1-202ENST00000411463 NFU1Q9UMS0 254 aa22.64■■□□□ 1.21
R3HCC1-202ENST00000411463 KLK4Q9Y5K2 254 aa22.64■■□□□ 1.21
R3HCC1-202ENST00000411463 PABPN1LA6NDY0 278 aaKnown RBP22.63■■□□□ 1.21
R3HCC1-202ENST00000411463 OR2B3O76000 313 aa22.63■■□□□ 1.21
R3HCC1-202ENST00000411463 YBX1P67809 324 aaKnown RBP22.63■■□□□ 1.21
R3HCC1-202ENST00000411463 NAA25Q14CX7 972 aa22.63■■□□□ 1.21
R3HCC1-202ENST00000411463 EFTUD2Q15029 972 aaKnown RBP eCLIP22.63■■□□□ 1.213e-6■■■□□ 18.3
R3HCC1-202ENST00000411463 ZC3H12BQ5HYM0 836 aaKnown RBP22.63■■□□□ 1.21
R3HCC1-202ENST00000411463 SLC38A9Q8NBW4 561 aa22.63■■□□□ 1.21
R3HCC1-202ENST00000411463 LRRN4CLQ8ND94 238 aa22.63■■□□□ 1.21
R3HCC1-202ENST00000411463 CYTH2Q99418 400 aa22.63■■□□□ 1.21
R3HCC1-202ENST00000411463 EURLQ9NYK6 297 aa22.63■■□□□ 1.21
R3HCC1-202ENST00000411463 STMN1P16949 149 aa22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 WT1P19544 449 aaPredicted RBP22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 AP1S2P56377 157 aa22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 PRDX1Q06830 199 aaKnown RBP22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 THEMIS2Q5TEJ8 643 aa22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 MBOAT1Q6ZNC8 495 aa22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 MCATQ8IVS2 390 aaKnown RBP22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 ZSCAN1Q8NBB4 408 aa22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 ANKRD49Q8WVL7 239 aa22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 CLIP3Q96DZ5 547 aa22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 DPH7Q9BTV6 452 aa22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 EFHD1Q9BUP0 239 aa22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 SPRTNQ9H040 489 aaPredicted RBP22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 ACTR5Q9H9F9 607 aaPredicted RBP22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 MRPS30Q9NP92 439 aaKnown RBP22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 LHX9Q9NQ69 397 aa22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 ABCF3Q9NUQ8 709 aa22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 ARL15Q9NXU5 204 aa22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 IKZF3Q9UKT9 509 aa22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 PCDHGA4Q9Y5G9 962 aa22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 PTPRQQ9UMZ3 2332 aa22.62■■□□□ 1.21
R3HCC1-202ENST00000411463 H3BMH7 237 aa22.61■■□□□ 1.21
R3HCC1-202ENST00000411463 ZNF749O43361 778 aa22.61■■□□□ 1.21
R3HCC1-202ENST00000411463 CCNDBP1O95273 360 aa22.61■■□□□ 1.21
R3HCC1-202ENST00000411463 ACSL3O95573 720 aa22.61■■□□□ 1.21
R3HCC1-202ENST00000411463 ENO2P09104 434 aaPredicted RBP22.61■■□□□ 1.21
R3HCC1-202ENST00000411463 UBAP2Q5T6F2 1119 aaKnown RBP22.61■■□□□ 1.21
R3HCC1-202ENST00000411463 ICE2Q659A1 982 aa22.61■■□□□ 1.21
R3HCC1-202ENST00000411463 AGTRAPQ6RW13 159 aa22.61■■□□□ 1.21
R3HCC1-202ENST00000411463 LRFN5Q96NI6 719 aa22.61■■□□□ 1.21
R3HCC1-202ENST00000411463 SLC7A5P2Q9GIP4 190 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms