RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 ELOVL6Q9H5J4 265 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 CD320Q9NPF0 282 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 MRGBPQ9NV56 204 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 CCDC167Q9P0B6 97 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 TBC1D29Q9UFV1 150 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 DYRK1BQ9Y463 629 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 GPR45Q9Y5Y3 372 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 EML5Q05BV3 1969 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 PRAMEF33A0A0G2JMD5 474 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 SLC28A1O00337 649 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 NDUFS2O75306 463 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 THEGLP0DJG4 465 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 IDO1P14902 403 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 NPPBP16860 134 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 GNAZP19086 355 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 SLC25A3Q00325 362 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 LRP8Q14114 963 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 E2F2Q14209 437 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 RPE65Q16518 533 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 CYP2A13Q16696 494 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 GSTA3Q16772 222 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 PRAMEF14Q5SWL7 426 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 CATSPEREQ5SY80 951 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 PRAMEF13Q5VWM6 474 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 SLCO4C1Q6ZQN7 724 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 HID1Q8IV36 788 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 RGL4Q8IZJ4 473 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 MIER2Q8N344 545 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 WDR20Q8TBZ3 569 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 RTKNQ9BST9 563 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 C1orf21Q9H246 121 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 SLC40A1Q9NP59 571 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 SDR39U1Q9NRG7 319 aaPredicted RBP13.6□□□□□ -0.23
GPNMB-203ENST00000409458 SIT1Q9Y3P8 196 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 KCNE2Q9Y6J6 123 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 FANCMQ8IYD8 2048 aa13.6□□□□□ -0.23
GPNMB-203ENST00000409458 K7ESF4 209 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 GSC2O15499 205 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 MTHFD1P11586 935 aaKnown RBP13.59□□□□□ -0.23
GPNMB-203ENST00000409458 ITGAXP20702 1163 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 ACTR1BP42025 376 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 MRPL19P49406 292 aaKnown RBP13.59□□□□□ -0.23
GPNMB-203ENST00000409458 MNAT1P51948 309 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 ACTR1AP61163 376 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 RPL38P63173 70 aaKnown RBP13.59□□□□□ -0.23
GPNMB-203ENST00000409458 EIF2B5Q13144 721 aaKnown RBP13.59□□□□□ -0.23
GPNMB-203ENST00000409458 ARHGAP19Q14CB8 494 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 IMPG1Q17R60 797 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 AP5B1Q2VPB7 878 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 FRG2Q64ET8 278 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 SLC30A9Q6PML9 568 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 LCTLQ6UWM7 567 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 NRROSQ86YC3 692 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 FUNDC1Q8IVP5 155 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 RNF175Q8N4F7 328 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 CAMKK1Q8N5S9 505 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 SLC5A11Q8WWX8 675 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 RCN3Q96D15 328 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 PPP3R2Q96LZ3 170 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 CAMK1GQ96NX5 476 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 RAB3IPQ96QF0 476 aaPredicted RBP13.59□□□□□ -0.23
GPNMB-203ENST00000409458 FRG2BQ96QU4 278 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 BRINP2Q9C0B6 783 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 TCEAL2Q9H3H9 227 aaPredicted RBP13.59□□□□□ -0.23
GPNMB-203ENST00000409458 POLR3HQ9Y535 204 aaPredicted RBP13.59□□□□□ -0.23
GPNMB-203ENST00000409458 DGKBQ9Y6T7 804 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 METTL12A8MUP2 240 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 C9JVG2 144 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 AIM2O14862 343 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 PI15O43692 258 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 CCND1P24385 295 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 PKLRP30613 574 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 HSD17B2P37059 387 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 HNF4AP41235 474 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 CASP2P42575 452 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 ACADVLP49748 655 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 NUDT2P50583 147 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 EMX2Q04743 252 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 FZD2Q14332 565 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 MAPRE2Q15555 327 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 DNAL1Q4LDG9 190 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 RFTN2Q52LD8 501 aaPredicted RBP13.59□□□□□ -0.23
GPNMB-203ENST00000409458 PDCD4Q53EL6 469 aaKnown RBP13.59□□□□□ -0.23
GPNMB-203ENST00000409458 THEMIS2Q5TEJ8 643 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 ADNP2Q6IQ32 1131 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 LAYNQ6UX15 382 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 HOMEZQ8IX15 550 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 LINC01555Q8NAE3 123 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 WDR34Q96EX3 536 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 SPNS1Q9H2V7 528 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 XKR8Q9H6D3 395 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 MVB12BQ9H7P6 319 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 LRTM1Q9HBL6 345 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 AASDHPPTQ9NRN7 309 aa13.59□□□□□ -0.23
GPNMB-203ENST00000409458 TRNAU1APQ9NX07 287 aaKnown RBP13.59□□□□□ -0.23
GPNMB-203ENST00000409458 SPTY2D1-AS1A0A0U1RR47 76 aa13.58□□□□□ -0.24
GPNMB-203ENST00000409458 A0A1W2PPV9 198 aa13.58□□□□□ -0.24
GPNMB-203ENST00000409458 SERTM1A2A2V5 107 aa13.58□□□□□ -0.24
GPNMB-203ENST00000409458 A6NCN8 305 aa13.58□□□□□ -0.24
GPNMB-203ENST00000409458 A8MUI8 341 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms