RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 LEFTY2O00292 366 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 CLIC2O15247 247 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 CHADO15335 359 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 TGFB1I1O43294 461 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 AVILO75366 819 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 UPK1BO75841 260 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 KRT34O76011 436 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 VAPBO95292 243 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 TDP2O95551 362 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 IFNB1P01574 187 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 YES1P07947 543 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 TSPY3P0CV98 308 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 TSPY8P0CW00 308 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 GFAPP14136 432 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 CYP11B1P15538 503 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 IL10P22301 178 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 NR4A1P22736 598 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 CFL1P23528 166 aaKnown RBP5.34□□□□□ -1.55
CLK1-202ENST00000409403 TBXAS1P24557 533 aaPredicted RBP5.34□□□□□ -1.55
CLK1-202ENST00000409403 SLC9A3P48764 834 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 MAPK10P53779 464 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 NHLH2Q02577 135 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 TAP1Q03518 808 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 ENPEPQ07075 957 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 EPS8Q12929 822 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 STX5Q13190 355 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 SHROOM1Q2M3G4 852 aaPredicted RBP5.34□□□□□ -1.55
CLK1-202ENST00000409403 SPATS1Q496A3 300 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 CBWD6Q4V339 395 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 EPC2Q52LR7 807 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 SOWAHCQ53LP3 525 aaPredicted RBP5.34□□□□□ -1.55
CLK1-202ENST00000409403 TFDP3Q5H9I0 405 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 CBWD3Q5JTY5 395 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 SAMD4BQ5PRF9 694 aaKnown RBP5.34□□□□□ -1.55
CLK1-202ENST00000409403 CBWD5Q5RIA9 395 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.34□□□□□ -1.55
CLK1-202ENST00000409403 FAM102AQ5T9C2 384 aaPredicted RBP5.34□□□□□ -1.55
CLK1-202ENST00000409403 AGAP9Q5VTM2 703 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 PSRC1Q6PGN9 363 aaPredicted RBP5.34□□□□□ -1.55
CLK1-202ENST00000409403 EPGNQ6UW88 154 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 BEND5Q7L4P6 421 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 PRSS48Q7RTY5 328 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 GALNT7Q86SF2 657 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 LINC00523Q86TU6 105 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 RALGPS2Q86X27 583 aaPredicted RBP5.34□□□□□ -1.55
CLK1-202ENST00000409403 UNC45BQ8IWX7 931 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 MCOLN2Q8IZK6 566 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 CFAP52Q8N1V2 620 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 TCAIMQ8N3R3 496 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 ZNF808Q8N4W9 903 aaPredicted RBP5.34□□□□□ -1.55
CLK1-202ENST00000409403 OR56A3Q8NH54 315 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 LMO3Q8TAP4 145 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 IPCEF1Q8WWN9 437 aaPredicted RBP5.34□□□□□ -1.55
CLK1-202ENST00000409403 SEPT1Q8WYJ6 367 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 CPT1BQ92523 772 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 PPWD1Q96BP3 646 aaKnown RBP5.34□□□□□ -1.55
CLK1-202ENST00000409403 OMA1Q96E52 524 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 MARS2Q96GW9 593 aaKnown RBP5.34□□□□□ -1.55
CLK1-202ENST00000409403 SLC45A3Q96JT2 553 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 MBOAT7Q96N66 472 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 SLITRK1Q96PX8 696 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 CIB1Q99828 191 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 APOL4Q9BPW4 351 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 MECRQ9BV79 373 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 ACAT2Q9BWD1 397 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 ZNF717Q9BY31 904 aaPredicted RBP5.34□□□□□ -1.55
CLK1-202ENST00000409403 MRPL9Q9BYD2 267 aaKnown RBP5.34□□□□□ -1.55
CLK1-202ENST00000409403 B3GNT4Q9C0J1 378 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 MUC13Q9H3R2 512 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 FANCEQ9HB96 536 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 ACP6Q9NPH0 428 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 RPRD1BQ9NQG5 326 aaKnown RBP5.34□□□□□ -1.55
CLK1-202ENST00000409403 AGPAT3Q9NRZ7 376 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 COMMD8Q9NX08 183 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 XPR1Q9UBH6 696 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 ATP6V1HQ9UI12 483 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 ANAPC2Q9UJX6 822 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.34□□□□□ -1.55
CLK1-202ENST00000409403 VPS4AQ9UN37 437 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 NOSIPQ9Y314 301 aaKnown RBP5.34□□□□□ -1.55
CLK1-202ENST00000409403 SNX5Q9Y5X3 404 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 RAD54BQ9Y620 910 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 IGF2RP11717 2491 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 ZNF236Q9UL36 1845 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 ITPR1Q14643 2758 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 RNF103-CHMP3A0A140T963 221 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 A0A1W2PQ72 361 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 OR5K3A6NET4 321 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 AQP12BA6NM10 295 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 PDZK1P1A8MUH7 402 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 FOXD2O60548 495 aaPredicted RBP5.34□□□□□ -1.56
CLK1-202ENST00000409403 SERPINI2O75830 405 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 SORBS2O94875 1100 aaKnown RBP5.34□□□□□ -1.56
CLK1-202ENST00000409403 MFN2O95140 757 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 RASAL1O95294 804 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 HSPA4LO95757 839 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 NDST3O95803 873 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 FGF3P11487 239 aaPredicted RBP5.34□□□□□ -1.56
CLK1-202ENST00000409403 ENO3P13929 434 aaPredicted RBP5.34□□□□□ -1.56
CLK1-202ENST00000409403 IL1R1P14778 569 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms