RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 SPARCL1Q14515 664 aa15.89■□□□□ 0.13
CHMP3-203ENST00000409225 SF1Q15637 639 aaKnown RBP15.89■□□□□ 0.13
CHMP3-203ENST00000409225 SLC18A3Q16572 532 aa15.89■□□□□ 0.13
CHMP3-203ENST00000409225 TAZQ16635 292 aa15.89■□□□□ 0.13
CHMP3-203ENST00000409225 ABHD17BQ5VST6 288 aa15.89■□□□□ 0.13
CHMP3-203ENST00000409225 SLC22A18Q96BI1 424 aa15.89■□□□□ 0.13
CHMP3-203ENST00000409225 RNF32Q9H0A6 362 aa15.89■□□□□ 0.13
CHMP3-203ENST00000409225 TSPAN10Q9H1Z9 355 aaPredicted RBP15.89■□□□□ 0.13
CHMP3-203ENST00000409225 IMPACTQ9P2X3 320 aa15.89■□□□□ 0.13
CHMP3-203ENST00000409225 CPAMD8Q8IZJ3 1885 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 IDSB3KWA1 339 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 H7C0C1 242 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 FFAR3O14843 346 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 FANCGO15287 622 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 GPR42O15529 346 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 CTSVO60911 334 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 S1PR4O95977 384 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 MYBL2P10244 700 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 CD9P21926 228 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 ATP5OP48047 213 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 CACNG1Q06432 222 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 ZNF33BQ06732 778 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 PRPSAP1Q14558 356 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 ZNF766Q5HY98 468 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 FRMPD2BQ6IN97 320 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 DENND5AQ6IQ26 1287 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 RIPOR1Q6ZS17 1223 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 NEK10Q6ZWH5 1172 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 SPPL2CQ8IUH8 684 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 CCDC50Q8IVM0 306 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 MMP21Q8N119 569 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 CFAP61Q8NHU2 1237 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 C19orf43Q9BQ61 176 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 TBL1YQ9BQ87 522 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 YIPF2Q9BWQ6 316 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 ENKD1Q9H0I2 346 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 RIC8BQ9NVN3 520 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 ZC3H7BQ9UGR2 993 aaKnown RBP15.88■□□□□ 0.13
CHMP3-203ENST00000409225 ZNF835Q9Y2P0 537 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 AAR2Q9Y312 384 aaKnown RBP15.88■□□□□ 0.13
CHMP3-203ENST00000409225 FAM169AQ9Y6X4 670 aa15.88■□□□□ 0.13
CHMP3-203ENST00000409225 QSOX1O00391 747 aa15.87■□□□□ 0.13
CHMP3-203ENST00000409225 SPOPO43791 374 aa15.87■□□□□ 0.13
CHMP3-203ENST00000409225 GYPCP04921 128 aa15.87■□□□□ 0.13
CHMP3-203ENST00000409225 EIF2S1P05198 315 aaKnown RBP15.87■□□□□ 0.13
CHMP3-203ENST00000409225 PLOD1Q02809 727 aaPredicted RBP15.87■□□□□ 0.13
CHMP3-203ENST00000409225 PRMT9Q6P2P2 845 aa15.87■□□□□ 0.13
CHMP3-203ENST00000409225 Q6ZPB1 254 aaPredicted RBP15.87■□□□□ 0.13
CHMP3-203ENST00000409225 GPR137Q96N19 417 aa15.87■□□□□ 0.13
CHMP3-203ENST00000409225 MENTQ9BUN1 341 aa15.87■□□□□ 0.13
CHMP3-203ENST00000409225 ENAMQ9NRM1 1142 aa15.87■□□□□ 0.13
CHMP3-203ENST00000409225 NLE1Q9NVX2 485 aaPredicted RBP15.87■□□□□ 0.13
CHMP3-203ENST00000409225 STMN3Q9NZ72 180 aa15.87■□□□□ 0.13
CHMP3-203ENST00000409225 IGLV3-12A0A075B6K2 115 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 hCG_1818297A0A087WSY0 165 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 LOC105369274A0A096LPK9 316 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 LOC102723532A0A0G2JNH3 316 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 A0A0J9YVX5 310 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 H7C0S8 307 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 ZNHIT1O43257 154 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 NRP2O60462 931 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 SRPX2O60687 465 aaPredicted RBP15.86■□□□□ 0.13
CHMP3-203ENST00000409225 HEXBP07686 556 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 CD99P14209 185 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 COMTP21964 271 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 SLC1A1P43005 524 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 PCOLCEQ15113 449 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 LONRF1Q17RB8 773 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 DNAJC21Q5F1R6 531 aaKnown RBP15.86■□□□□ 0.13
CHMP3-203ENST00000409225 ANKRD20A2Q5SQ80 823 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 ANKRD20A1Q5TYW2 823 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 ANKRD20A3Q5VUR7 823 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 RHOT2Q8IXI1 618 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 OR4N4Q8N0Y3 316 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 OR2L8Q8NGY9 312 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 CDKN2AIPNLQ96HQ2 116 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 TRPC4Q9UBN4 977 aa15.86■□□□□ 0.13
CHMP3-203ENST00000409225 A0A1W2PQ72 361 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 OR51F1A6NGY5 319 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 NPIPA5E9PKD4 350 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 OR56A5P0C7T3 313 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 TPH1P17752 444 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 PSMB5P28074 263 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 ALDH6A1Q02252 535 aaKnown RBP15.85■□□□□ 0.13
CHMP3-203ENST00000409225 GRB7Q14451 532 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 ITIH4Q14624 930 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 MUM1Q2TAK8 710 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 ASTE1Q2TB18 679 aaPredicted RBP15.85■□□□□ 0.13
CHMP3-203ENST00000409225 C3P1Q6ZMU1 363 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 VRK3Q8IV63 474 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 DCUN1D3Q8IWE4 304 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 ACBD4Q8NC06 268 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.85■□□□□ 0.13
CHMP3-203ENST00000409225 THAP3Q8WTV1 239 aaPredicted RBP15.85■□□□□ 0.13
CHMP3-203ENST00000409225 ZUFSPQ96AP4 578 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 IQCDQ96DY2 449 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 CABS1Q96KC9 395 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 C10orf90Q96M02 699 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 MIPEPQ99797 713 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 ANP32EQ9BTT0 268 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms