RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 ZNF304Q9HCX3 659 aa12.24□□□□□ -0.45
CHRNA1-203ENST00000409219 NPDC1Q9NQX5 325 aaPredicted RBP12.24□□□□□ -0.45
CHRNA1-203ENST00000409219 DLL4Q9NR61 685 aa12.24□□□□□ -0.45
CHRNA1-203ENST00000409219 CTTNBP2NLQ9P2B4 639 aa12.24□□□□□ -0.45
CHRNA1-203ENST00000409219 KLHL8Q9P2G9 620 aaPredicted RBP12.24□□□□□ -0.45
CHRNA1-203ENST00000409219 SAE1Q9UBE0 346 aaPredicted RBP12.24□□□□□ -0.45
CHRNA1-203ENST00000409219 TRBV5-4A0A0C4DH59 114 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 IDSB3KWA1 339 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 E9PLN8 166 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 CCL22O00626 93 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 LIN7AO14910 233 aaPredicted RBP12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 SLCO2B1O94956 709 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 ZRANB2O95218 330 aaKnown RBP eCLIP12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 AP2A1O95782 977 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 AGTP01019 485 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 PRSS56P0CW18 603 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 ABOP16442 354 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 ZFXP17010 805 aaPredicted RBP12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 ACRV1P26436 265 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 ZNF140P52738 457 aaPredicted RBP12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 PPP2R2AP63151 447 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 ZNF33BQ06732 778 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 FOXD4Q12950 439 aaPredicted RBP12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 OLIG2Q13516 323 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 BRD3Q15059 726 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 PCOLCEQ15113 449 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 KRTCAP3Q53RY4 240 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 ZC3H12BQ5HYM0 836 aaKnown RBP12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 DOLPP1Q86YN1 238 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 RFX6Q8HWS3 928 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 CHERPQ8IWX8 916 aaKnown RBP12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 C17orf53Q8N3J3 647 aaPredicted RBP12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 TFB1MQ8WVM0 346 aaKnown RBP12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 NAP1L5Q96NT1 182 aaPredicted RBP12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 VKORC1Q9BQB6 163 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 SELENOSQ9BQE4 189 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 GORASP1Q9BQQ3 440 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 MENTQ9BUN1 341 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 HES7Q9BYE0 225 aa12.23□□□□□ -0.45
CHRNA1-203ENST00000409219 NSD1Q96L73 2696 aaPredicted RBP12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 A0A1B0GTH6 734 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 C5orf60A6NFR6 353 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 NPIPA5E9PKD4 350 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 MLYCDO95822 493 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 GSTM1P09488 218 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 MYBL2P10244 700 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 PECAM1P16284 738 aaPredicted RBP12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 CXCR2P25025 360 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 VSX2P58304 361 aaPredicted RBP12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 HSF1Q00613 529 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 ALDH6A1Q02252 535 aaKnown RBP12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 GSTM4Q03013 218 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 TBX2Q13207 712 aaPredicted RBP12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 FAM214AQ32MH5 1076 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 ALKBH5Q6P6C2 394 aaKnown RBP12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 FIGLAQ6QHK4 219 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 PID1Q7Z2X4 250 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 TAX1BP1Q86VP1 789 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 SERPINA9Q86WD7 417 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 DNAAF3Q8N9W5 541 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 FRMD6Q96NE9 622 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 TRIM51Q9BSJ1 452 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 MAK16Q9BXY0 300 aaKnown RBP12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 LUC7LQ9NQ29 371 aaKnown RBP12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 CCM2LQ9NUG4 571 aaPredicted RBP12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 PPT2Q9UMR5 302 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 NPIPA1Q9UND3 350 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 RPH3AQ9Y2J0 694 aaPredicted RBP12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 SCN2AQ99250 2005 aa12.22□□□□□ -0.45
CHRNA1-203ENST00000409219 ASPDHA6ND91 283 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 BHMG1C9JSJ3 638 aaPredicted RBP12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 FFAR3O14843 346 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 GPR42O15529 346 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 NRDCO43847 1150 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 CTSVO60911 334 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 KRT1P04264 644 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 FBLP22087 321 aaKnown RBP12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 MC4RP32245 332 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 EMP2P54851 167 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 TFF3Q07654 80 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 MSLNQ13421 630 aaPredicted RBP12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 NR1I3Q14994 352 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 GPR33Q49SQ1 333 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 WASHC2DQ5SRD0 308 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 FRMPD2BQ6IN97 320 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 PRMT9Q6P2P2 845 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 NAPRTQ6XQN6 538 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 SIAH3Q8IW03 269 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 C2orf73Q8N5S3 287 aaPredicted RBP12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 C10orf90Q96M02 699 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 SIGLEC12Q96PQ1 595 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 APOL2Q9BQE5 337 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 ZNF559Q9BR84 538 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 ZNF700Q9H0M5 742 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 KLHL1Q9NR64 748 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 STMN3Q9NZ72 180 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 COQ3Q9NZJ6 369 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 STOX2Q9P2F5 926 aaPredicted RBP12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 UVRAGQ9P2Y5 699 aa12.21□□□□□ -0.45
CHRNA1-203ENST00000409219 CIDEBQ9UHD4 219 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms