RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 LCN1P31025 176 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 INHBEP58166 350 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 GPX6P59796 221 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 XKR4Q5GH76 650 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 ZC3HC1Q86WB0 502 aaKnown RBP12.68□□□□□ -0.38
RNF43-201ENST00000407977 OR5T3Q8NGG3 340 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 KCNC2Q96PR1 638 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 BTBD1Q9H0C5 482 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 ELAC1Q9H777 363 aaKnown RBP12.68□□□□□ -0.38
RNF43-201ENST00000407977 FAM120CQ9NX05 1096 aaKnown RBP12.68□□□□□ -0.38
RNF43-201ENST00000407977 LYARQ9NX58 379 aaKnown RBP12.68□□□□□ -0.38
RNF43-201ENST00000407977 FBXO9Q9UK97 447 aaPredicted RBP12.68□□□□□ -0.38
RNF43-201ENST00000407977 TSPAN1O60635 241 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 RCBTB2O95199 551 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 CYB5AP00167 134 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 ENGP17813 658 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 HK1P19367 917 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 DDX6P26196 483 aaKnown RBP eCLIP12.68□□□□□ -0.381e-6■■■■■ 29.9
RNF43-201ENST00000407977 ATXN1P54253 815 aaKnown RBP12.68□□□□□ -0.38
RNF43-201ENST00000407977 ZNF33AQ06730 810 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 SLC10A7Q0GE19 358 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 KLF1Q13351 362 aaPredicted RBP12.68□□□□□ -0.38
RNF43-201ENST00000407977 TCEAL1Q15170 157 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 C9orf131Q5VYM1 1079 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 SMYD5Q6GMV2 418 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 SMARCD3Q6STE5 483 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 GALNT6Q8NCL4 622 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 BPIFB1Q8TDL5 484 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 TRUB1Q8WWH5 349 aaKnown RBP12.68□□□□□ -0.38
RNF43-201ENST00000407977 NDC1Q9BTX1 674 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 ITM2CQ9NQX7 267 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 SIRPGQ9P1W8 387 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 ZDHHC2Q9UIJ5 367 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 LRRIQ1Q96JM4 1722 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 SYN3O14994 580 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 OR1F1O43749 312 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 DLDP09622 509 aaKnown RBP12.68□□□□□ -0.38
RNF43-201ENST00000407977 PROZP22891 400 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 ARSFP54793 590 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 DNAJB13P59910 316 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 MAP2K5Q13163 448 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 FBXO48Q5FWF7 155 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 SH3D19Q5HYK7 790 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 NOL9Q5SY16 702 aaKnown RBP12.68□□□□□ -0.38
RNF43-201ENST00000407977 SNX27Q96L92 541 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 PCDHGC4Q9Y5F7 938 aa12.68□□□□□ -0.38
RNF43-201ENST00000407977 AXIN1O15169 862 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 SLC19A2O60779 497 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 CREG1O75629 220 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 DBIP07108 87 aaKnown RBP12.67□□□□□ -0.38
RNF43-201ENST00000407977 FAM163BP0C2L3 166 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 GABRR2P28476 465 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 RYKP34925 604 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 SLC9A3P48764 834 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 DUSP4Q13115 394 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 ANKDD1AQ495B1 522 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 SH3PXD2AQ5TCZ1 1133 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 CERS5Q8N5B7 392 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 TMEM80Q96HE8 168 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 ZNF696Q9H7X3 374 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 TMLHEQ9NVH6 421 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 ZNF358Q9NW07 568 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 CFAP97Q9P2B7 532 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 ZNF69Q9UC07 566 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 HCN2Q9UL51 889 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 CDH7Q9ULB5 785 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 PCDHGB2Q9Y5G2 931 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 CCL22O00626 93 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 AKT2P31751 481 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 OR1D2P34982 312 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 ASPAP45381 313 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 ZNF630Q2M218 657 aaPredicted RBP12.67□□□□□ -0.38
RNF43-201ENST00000407977 FAAH2Q6GMR7 532 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 RAB12Q6IQ22 244 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 MSANTD2Q6P1R3 559 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 KIAA1324Q6UXG2 1013 aaKnown RBP12.67□□□□□ -0.38
RNF43-201ENST00000407977 CFAP206Q8IYR0 622 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 PHTF2Q8N3S3 785 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 COX18Q8N8Q8 333 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 RBM18Q96H35 190 aaKnown RBP12.67□□□□□ -0.38
RNF43-201ENST00000407977 OSBPL2Q9H1P3 480 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 TREM1Q9NP99 234 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 PTPRJQ12913 1337 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 IQCF5A8MTL0 148 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 CXorf49A8MYA2 514 aaPredicted RBP12.67□□□□□ -0.38
RNF43-201ENST00000407977 CDRT1O95170 752 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 MATN4O95460 622 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 RB1P06400 928 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 MPIP34949 423 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 MAP3K8P41279 467 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 COL9A3Q14050 684 aaPredicted RBP12.67□□□□□ -0.38
RNF43-201ENST00000407977 TLR1Q15399 786 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 PRPF38BQ5VTL8 546 aaKnown RBP12.67□□□□□ -0.38
RNF43-201ENST00000407977 MEDAGQ5VYS4 303 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 TCEAL6Q6IPX3 200 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 ZNF676Q8N7Q3 588 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 AKAP1Q92667 903 aaKnown RBP eCLIP12.67□□□□□ -0.38
RNF43-201ENST00000407977 PSMG2Q969U7 264 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 SLC32A1Q9H598 525 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms