RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 PIGFQ07326 219 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 DGUOKQ16854 277 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 CTU2Q2VPK5 515 aaKnown RBP15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 SIRPB2Q5JXA9 342 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 STEAP3Q658P3 488 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 BRAT1Q6PJG6 821 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 BEND4Q6ZU67 534 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 WDR48Q8TAF3 677 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 TMEM40Q8WWA1 233 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 AMBRA1Q9C0C7 1298 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 TMLHEQ9NVH6 421 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 USE1Q9NZ43 259 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 MPP6Q9NZW5 540 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 KRT87PA6NCN2 255 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 E9PAM4 449 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 PTGES3LE9PB15 166 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 GNGT2O14610 69 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 PEX11BO96011 259 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 RPS17P08708 135 aaKnown RBP15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 CYP2A6P11509 494 aaPredicted RBP15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 PCSK1P29120 753 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 GP2P55259 537 aaKnown RBP15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 BTN1A1Q13410 526 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 IQCCQ4KMZ1 466 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 DLEU7Q6UYE1 221 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 SYVN1Q86TM6 617 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 GLB1L3Q8NCI6 653 aaPredicted RBP15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 PPM1MQ96MI6 270 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 AARSD1Q9BTE6 412 aaKnown RBP15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 DERL2Q9GZP9 239 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 CCDC90BQ9GZT6 254 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 PRELID3BQ9Y3B1 194 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 NAALAD2Q9Y3Q0 740 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 PCDHGA2Q9Y5H1 932 aa15.81■□□□□ 0.12
COL4A3BP-204ENST00000405807 POP4O95707 220 aaKnown RBP15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 CST1P01037 141 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 PCMT1P22061 227 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 DSC2Q02487 901 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 TEKQ02763 1124 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 TMEM81Q6P7N7 255 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 SCIMPQ6UWF3 145 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 OR52H1Q8NGJ2 320 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 MNTQ99583 582 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 GAL3ST1Q99999 423 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 GORASP2Q9H8Y8 452 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 NECTIN3Q9NQS3 549 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 CD274Q9NZQ7 290 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 SLC1A7O00341 560 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 TBX1O43435 398 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 NOBOXO60393 691 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 GABARAPO95166 117 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 MMP2P08253 660 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 POU3F3P20264 500 aaPredicted RBP15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 AGXTP21549 392 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 MAOBP27338 520 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 EIF2DP41214 584 aaKnown RBP15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 MTPNP58546 118 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 ACVR1Q04771 509 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 FAPQ12884 760 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 KCNAB2Q13303 367 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 RBBP7Q16576 425 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 ZNF792Q3KQV3 632 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 ATP6AP1LQ52LC2 224 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 C6orf136Q5SQH8 315 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 RETSATQ6NUM9 610 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 ZNF767PQ75MW2 155 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 MYLPFQ96A32 169 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 ZHX1-C8orf76Q96EF9 292 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 ZFP42Q96MM3 310 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 TRIM45Q9H8W5 580 aaPredicted RBP15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 SPC25Q9HBM1 224 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 EVA1BQ9NVM1 165 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 SMPD4Q9NXE4 827 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 C3orf18Q9UK00 162 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 NUDT5Q9UKK9 219 aa15.8■□□□□ 0.12
COL4A3BP-204ENST00000405807 LOC100130705A0A1B0GUX0 176 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 ARNTLO00327 626 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 IFRD1O00458 451 aaPredicted RBP15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 STX16O14662 325 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 SYN3O14994 580 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 GSTA4O15217 222 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 RGS5O15539 181 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 GMDSO60547 372 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 ECI2O75521 394 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 HOXD8P13378 290 aaPredicted RBP15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 PRDX3P30048 256 aaKnown RBP15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 UGT2B10P36537 528 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 PIGAP37287 484 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 TPMTP51580 245 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 SLC10A7Q0GE19 358 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 RIN1Q13671 783 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 TXNDC11Q6PKC3 985 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 P3H2Q8IVL5 708 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 OR4M1Q8NGD0 313 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 OR6Q1Q8NGQ2 317 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 OR2T11Q8NH01 316 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 DNAJB3Q8WWF6 145 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 FATE1Q969F0 183 aa15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 CINPQ9BW66 212 aaPredicted RBP15.79■□□□□ 0.12
COL4A3BP-204ENST00000405807 C1QTNF3Q9BXJ4 246 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms