RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 PIM1P11309 404 aaPredicted RBP11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 PSMB5P28074 263 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 NSG1P42857 185 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 MARCKSL1P49006 195 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 GEMP55040 296 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CSE1LP55060 971 aaKnown RBP11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 GRM7Q14831 915 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 GPR33Q49SQ1 333 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 WASHC2DQ5SRD0 308 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 FAAH2Q6GMR7 532 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 TAS2R42Q7RTR8 314 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CCDC110Q8TBZ0 833 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 HEXDCQ8WVB3 486 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CTNNBL1Q8WYA6 563 aaPredicted RBP11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ELMO1Q92556 727 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 MIEF2Q96C03 454 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 VAT1Q99536 393 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 NPAS2Q99743 824 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 SELENOSQ9BQE4 189 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 GOLPH3Q9H4A6 298 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ZNF304Q9HCX3 659 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 SMARCAL1Q9NZC9 954 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 POLG2Q9UHN1 485 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ZNF407Q9C0G0 2248 aa11.32□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CSPG4Q6UVK1 2322 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 HYKKA2RU49 373 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 OR1I1O60431 355 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 MAN1A2O60476 641 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CRYABP02511 175 aaKnown RBP11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 TPH1P17752 444 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 IGFBP2P18065 325 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CD9P21926 228 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 COMTP21964 271 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 RAB28P51157 221 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 HSF1Q00613 529 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CACNG1Q06432 222 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 SLC18A3Q16572 532 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CCSMST1Q4G0I0 132 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 TFDP3Q5H9I0 405 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 YOD1Q5VVQ6 348 aaPredicted RBP11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 C3P1Q6ZMU1 363 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 MEX3BQ6ZN04 569 aaKnown RBP11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 SPPL2CQ8IUH8 684 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 SIAH3Q8IW03 269 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 KLHDC8BQ8IXV7 354 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CDKN2AIPNLQ96HQ2 116 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 IMMP1LQ96LU5 166 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 SIGLEC12Q96PQ1 595 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 DMRTA2Q96SC8 542 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 RNF32Q9H0A6 362 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 IMPACTQ9P2X3 320 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 TRHDEQ9UKU6 1024 aa11.31□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ATRQ13535 2644 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 LOC102723996A0A087X1L8 192 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 OR5H15A6NDH6 313 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 IDSB3KWA1 339 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 AP2A2O94973 939 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 NADKO95544 446 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CRTAMO95727 393 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ESRRAP11474 423 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 PSMA3P25788 255 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CCR7P32248 378 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 TNNT3P45378 269 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CARSP49589 748 aaKnown RBP11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 SMSP52788 366 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ART1P52961 327 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 EMP2P54851 167 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 TFDP2Q14188 446 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 SYT16Q17RD7 645 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 PRTGQ2VWP7 1150 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 TCTE1Q5JU00 501 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 FCRLBQ6BAA4 426 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CNSTQ6PJW8 725 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 NEK10Q6ZWH5 1172 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 BZW1Q7L1Q6 419 aaKnown RBP11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ARHGEF39Q8N4T4 335 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 AMER3Q8N944 861 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 GPR137Q96N19 417 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 FAM118BQ9BPY3 351 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 GSX1Q9H4S2 264 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 VPS37BQ9H9H4 285 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ARNT2Q9HBZ2 717 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 LUC7LQ9NQ29 371 aaKnown RBP11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 NPDC1Q9NQX5 325 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 NLE1Q9NVX2 485 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 PIH1D1Q9NWS0 290 aaKnown RBP11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ZNF282Q9UDV7 671 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ZC3H7BQ9UGR2 993 aaKnown RBP11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 HRH3Q9Y5N1 445 aa11.3□□□□□ -0.6
SPTLC1P3-201ENST00000403408 IGHV3-20A0A0C4DH32 117 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 A0A0J9YVX5 310 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 A0A0U1RQJ8 604 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 A0A1W2PPV9 198 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 IQCF5A8MTL0 148 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 HACD1B0YJ81 288 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ANXA9O76027 345 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 GSTM1P09488 218 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 FOXN2P32314 431 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 GSTM4Q03013 218 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms