RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 SCRG1O75711 98 aa18.47■□□□□ 0.55
RTN4-207ENST00000402434 SYF2O95926 243 aaKnown RBP18.47■□□□□ 0.55
RTN4-207ENST00000402434 MT-ND3P03897 115 aa18.47■□□□□ 0.55
RTN4-207ENST00000402434 CYP2A7P20853 494 aa18.47■□□□□ 0.55
RTN4-207ENST00000402434 SAT1P21673 171 aa18.47■□□□□ 0.55
RTN4-207ENST00000402434 IMPA1P29218 277 aa18.47■□□□□ 0.55
RTN4-207ENST00000402434 STAT5AP42229 794 aa18.47■□□□□ 0.55
RTN4-207ENST00000402434 GRIA3P42263 894 aa18.47■□□□□ 0.55
RTN4-207ENST00000402434 NAB1Q13506 487 aa18.47■□□□□ 0.55
RTN4-207ENST00000402434 PHKG1Q16816 387 aa18.47■□□□□ 0.55
RTN4-207ENST00000402434 GRTP1Q5TC63 336 aa18.47■□□□□ 0.55
RTN4-207ENST00000402434 FIGLAQ6QHK4 219 aa18.47■□□□□ 0.55
RTN4-207ENST00000402434 SUSD1Q6UWL2 747 aa18.47■□□□□ 0.55
RTN4-207ENST00000402434 TMEM126BQ8IUX1 230 aa18.47■□□□□ 0.55
RTN4-207ENST00000402434 NKAPQ8N5F7 415 aaKnown RBP18.47■□□□□ 0.55
RTN4-207ENST00000402434 CCDC138Q96M89 665 aa18.47■□□□□ 0.55
RTN4-207ENST00000402434 NINJ2Q9NZG7 142 aa18.47■□□□□ 0.55
RTN4-207ENST00000402434 LHX6Q9UPM6 363 aa18.47■□□□□ 0.55
RTN4-207ENST00000402434 FAM208BQ5VWN6 2430 aa18.47■□□□□ 0.55
RTN4-207ENST00000402434 LOC101059948A0A1B0GTJ6 334 aa18.46■□□□□ 0.55
RTN4-207ENST00000402434 CPNE3O75131 537 aaKnown RBP18.46■□□□□ 0.55
RTN4-207ENST00000402434 WISP3O95389 354 aaPredicted RBP18.46■□□□□ 0.55
RTN4-207ENST00000402434 NTRK1P04629 796 aa18.46■□□□□ 0.55
RTN4-207ENST00000402434 WT1P19544 449 aaPredicted RBP18.46■□□□□ 0.55
RTN4-207ENST00000402434 SPRP35270 261 aaPredicted RBP18.46■□□□□ 0.55
RTN4-207ENST00000402434 ITGA1P56199 1179 aa18.46■□□□□ 0.55
RTN4-207ENST00000402434 CXADRP78310 365 aa18.46■□□□□ 0.55
RTN4-207ENST00000402434 ZNF460Q14592 562 aa18.46■□□□□ 0.55
RTN4-207ENST00000402434 FCRL6Q6DN72 434 aa18.46■□□□□ 0.55
RTN4-207ENST00000402434 IFT20Q8IY31 132 aa18.46■□□□□ 0.55
RTN4-207ENST00000402434 SYTL1Q8IYJ3 562 aa18.46■□□□□ 0.55
RTN4-207ENST00000402434 PPM1NQ8N819 430 aa18.46■□□□□ 0.55
RTN4-207ENST00000402434 SLC38A9Q8NBW4 561 aa18.46■□□□□ 0.55
RTN4-207ENST00000402434 LRFN5Q96NI6 719 aa18.46■□□□□ 0.55
RTN4-207ENST00000402434 MIPEPQ99797 713 aa18.46■□□□□ 0.55
RTN4-207ENST00000402434 FUT8Q9BYC5 575 aa18.46■□□□□ 0.55
RTN4-207ENST00000402434 WDR70Q9NW82 654 aa18.46■□□□□ 0.55
RTN4-207ENST00000402434 PADI1Q9ULC6 663 aa18.46■□□□□ 0.55
RTN4-207ENST00000402434 PLCL2Q9UPR0 1127 aa18.46■□□□□ 0.55
RTN4-207ENST00000402434 NBEAQ8NFP9 2946 aa18.46■□□□□ 0.54
RTN4-207ENST00000402434 LIFP15018 202 aa18.46■□□□□ 0.54
RTN4-207ENST00000402434 PHBP35232 272 aa18.46■□□□□ 0.54
RTN4-207ENST00000402434 RPA3P35244 121 aaPredicted RBP18.46■□□□□ 0.54
RTN4-207ENST00000402434 SLC12A2P55011 1212 aa18.46■□□□□ 0.54
RTN4-207ENST00000402434 YBX1P67809 324 aaKnown RBP18.46■□□□□ 0.54
RTN4-207ENST00000402434 PRDX1Q06830 199 aaKnown RBP18.46■□□□□ 0.54
RTN4-207ENST00000402434 NAA25Q14CX7 972 aa18.46■□□□□ 0.54
RTN4-207ENST00000402434 PRAMEF17Q5VTA0 474 aa18.46■□□□□ 0.54
RTN4-207ENST00000402434 ZNF517Q6ZMY9 492 aaPredicted RBP18.46■□□□□ 0.54
RTN4-207ENST00000402434 GPR155Q7Z3F1 870 aa18.46■□□□□ 0.54
RTN4-207ENST00000402434 PPFIBP2Q8ND30 876 aa18.46■□□□□ 0.54
RTN4-207ENST00000402434 LRRN4CLQ8ND94 238 aa18.46■□□□□ 0.54
RTN4-207ENST00000402434 ANKRD49Q8WVL7 239 aa18.46■□□□□ 0.54
RTN4-207ENST00000402434 RNF31Q96EP0 1072 aa18.46■□□□□ 0.54
RTN4-207ENST00000402434 TSPAN17Q96FV3 270 aa18.46■□□□□ 0.54
RTN4-207ENST00000402434 CDC42EP4Q9H3Q1 356 aaKnown RBP18.46■□□□□ 0.54
RTN4-207ENST00000402434 GPAMQ9HCL2 828 aa18.46■□□□□ 0.54
RTN4-207ENST00000402434 LHX9Q9NQ69 397 aa18.46■□□□□ 0.54
RTN4-207ENST00000402434 ENAMQ9NRM1 1142 aa18.46■□□□□ 0.54
RTN4-207ENST00000402434 STOX2Q9P2F5 926 aaPredicted RBP18.46■□□□□ 0.54
RTN4-207ENST00000402434 NOVA2Q9UNW9 492 aaKnown RBP18.46■□□□□ 0.54
RTN4-207ENST00000402434 LOC400499M0QZD8 3231 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 HEATR5BQ9P2D3 2071 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 E7EQ34 232 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 TERTO14746 1132 aaKnown RBP18.45■□□□□ 0.54
RTN4-207ENST00000402434 ZNF500O60304 480 aaPredicted RBP18.45■□□□□ 0.54
RTN4-207ENST00000402434 FAM155BO75949 473 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 OR2B3O76000 313 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 ENO2P09104 434 aaPredicted RBP18.45■□□□□ 0.54
RTN4-207ENST00000402434 HIST1H2AGP0C0S8 130 aaPredicted RBP18.45■□□□□ 0.54
RTN4-207ENST00000402434 CCNYL3P0C7X3 344 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 HIST1H2ADP20671 130 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 CMPK1P30085 196 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 AP1S2P56377 157 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 USP10Q14694 798 aaKnown RBP18.45■□□□□ 0.54
RTN4-207ENST00000402434 ZKSCAN8Q15776 578 aaPredicted RBP18.45■□□□□ 0.54
RTN4-207ENST00000402434 DEFB110Q30KQ9 67 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 ZC3H12BQ5HYM0 836 aaKnown RBP18.45■□□□□ 0.54
RTN4-207ENST00000402434 UBAP2Q5T6F2 1119 aaKnown RBP18.45■□□□□ 0.54
RTN4-207ENST00000402434 ARHGAP40Q5TG30 622 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 SBSNQ6UWP8 590 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 GPR135Q8IZ08 494 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 N4BP2L2Q92802 583 aaPredicted RBP18.45■□□□□ 0.54
RTN4-207ENST00000402434 HIST1H2AHQ96KK5 128 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 CYTH2Q99418 400 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 HIST1H2AJQ99878 128 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 H2AFJQ9BTM1 129 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 EFHD1Q9BUP0 239 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 ACAT2Q9BWD1 397 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 ACSS3Q9H6R3 686 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 CAB39LQ9H9S4 337 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 EURLQ9NYK6 297 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 IKZF3Q9UKT9 509 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 PCDHGA4Q9Y5G9 962 aa18.45■□□□□ 0.54
RTN4-207ENST00000402434 OR2A25A4D2G3 310 aa18.44■□□□□ 0.54
RTN4-207ENST00000402434 CTSVO60911 334 aa18.44■□□□□ 0.54
RTN4-207ENST00000402434 RHOXF2BP0C7M4 288 aa18.44■□□□□ 0.54
RTN4-207ENST00000402434 RORAP35398 523 aa18.44■□□□□ 0.54
RTN4-207ENST00000402434 EFTUD2Q15029 972 aaKnown RBP eCLIP18.44■□□□□ 0.544e-14■■■■■ 28.8
RTN4-207ENST00000402434 PPP1R3AQ16821 1122 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms