RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 TMEM26Q6ZUK4 368 aa6.63□□□□□ -1.35
USP16-203ENST00000399975 EFL1Q7Z2Z2 1120 aaKnown RBP6.63□□□□□ -1.35
USP16-203ENST00000399975 CARFQ8N187 725 aa6.63□□□□□ -1.35
USP16-203ENST00000399975 ARL14Q8N4G2 192 aa6.63□□□□□ -1.35
USP16-203ENST00000399975 CCDC197Q8NCU1 140 aa6.63□□□□□ -1.35
USP16-203ENST00000399975 FAM46DQ8NEK8 389 aa6.63□□□□□ -1.35
USP16-203ENST00000399975 FLVCR1-AS1Q8TAF5 88 aa6.63□□□□□ -1.35
USP16-203ENST00000399975 PPP4R1Q8TF05 950 aa6.63□□□□□ -1.35
USP16-203ENST00000399975 EXT2Q93063 718 aa6.63□□□□□ -1.35
USP16-203ENST00000399975 HGH1Q9BTY7 390 aa6.63□□□□□ -1.35
USP16-203ENST00000399975 SARGQ9BW04 601 aa6.63□□□□□ -1.35
USP16-203ENST00000399975 ILKAPQ9H0C8 392 aaPredicted RBP6.63□□□□□ -1.35
USP16-203ENST00000399975 NSRP1Q9H0G5 558 aaKnown RBP6.63□□□□□ -1.35
USP16-203ENST00000399975 ZBTB26Q9HCK0 441 aa6.63□□□□□ -1.35
USP16-203ENST00000399975 CCDC177Q9NQR7 707 aaPredicted RBP6.63□□□□□ -1.35
USP16-203ENST00000399975 IMP3Q9NV31 184 aaKnown RBP6.63□□□□□ -1.35
USP16-203ENST00000399975 UCKL1Q9NWZ5 548 aa6.63□□□□□ -1.35
USP16-203ENST00000399975 FAM8A1Q9UBU6 413 aa6.63□□□□□ -1.35
USP16-203ENST00000399975 ASB1Q9Y576 335 aa6.63□□□□□ -1.35
USP16-203ENST00000399975 OR52A4PA6NMU1 304 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 UBFD1O14562 309 aaKnown RBP6.62□□□□□ -1.35
USP16-203ENST00000399975 TNFSF14O43557 240 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 NUDT21O43809 227 aaKnown RBP6.62□□□□□ -1.35
USP16-203ENST00000399975 SUPT7LO94864 414 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 SIX3O95343 332 aaPredicted RBP6.62□□□□□ -1.35
USP16-203ENST00000399975 VIPP01282 170 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 ALPPL2P10696 532 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 EPB42P16452 691 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 NPPBP16860 134 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 INHBCP55103 352 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 TBPL1P62380 186 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 C1orf61Q13536 156 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 LAPTM5Q13571 262 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 C18orf21Q32NC0 220 aaPredicted RBP6.62□□□□□ -1.35
USP16-203ENST00000399975 DUS1LQ6P1R4 473 aaKnown RBP6.62□□□□□ -1.35
USP16-203ENST00000399975 AMIGO1Q86WK6 493 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 CRLF3Q8IUI8 442 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 ADGRF3Q8IZF5 1079 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 LMNTD1Q8N9Z9 388 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 LINC01555Q8NAE3 123 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 ABHD11Q8NFV4 315 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 OR4K1Q8NGD4 311 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 SLC22A18Q96BI1 424 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 OR4K3Q96R72 315 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 CHRNA10Q9GZZ6 450 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 ARRDC1-AS1Q9H2J1 176 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 GAREM1Q9H706 876 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 ENAMQ9NRM1 1142 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 UTP6Q9NYH9 597 aaKnown RBP6.62□□□□□ -1.35
USP16-203ENST00000399975 TSR3Q9UJK0 312 aaKnown RBP6.62□□□□□ -1.35
USP16-203ENST00000399975 PPT2Q9UMR5 302 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 PCDHB11Q9Y5F2 797 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 R4GN57 208 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 LRRC14BA6NHZ5 514 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 NCF1BA6NI72 391 aaPredicted RBP6.62□□□□□ -1.35
USP16-203ENST00000399975 NCF1CA8MVU1 366 aaPredicted RBP6.62□□□□□ -1.35
USP16-203ENST00000399975 ZNF195O14628 629 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 ATP6V1G2O95670 118 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 HSPA4LO95757 839 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 CHRM5P08912 532 aaPredicted RBP6.62□□□□□ -1.35
USP16-203ENST00000399975 NEFHP12036 1026 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 NCF1P14598 390 aaPredicted RBP6.62□□□□□ -1.35
USP16-203ENST00000399975 GSTM2P28161 218 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 RPL14P50914 215 aaKnown RBP6.62□□□□□ -1.35
USP16-203ENST00000399975 IRX1P78414 480 aaPredicted RBP6.62□□□□□ -1.35
USP16-203ENST00000399975 BNIP3Q12983 259 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 NAE1Q13564 534 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 KRT33BQ14525 404 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 UGT3A2Q3SY77 523 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 PRAMEF14Q5SWL7 426 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 PRAMEF13Q5VWM6 474 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 TTC19Q6DKK2 380 aaPredicted RBP6.62□□□□□ -1.35
USP16-203ENST00000399975 GRHL2Q6ISB3 625 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 CGB2Q6NT52 195 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 ZCCHC23Q6ZST2 131 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 GPRIN3Q6ZVF9 776 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 CUZD1Q86UP6 607 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 TRIM48Q8IWZ4 208 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 CLYBLQ8N0X4 340 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 AFAP1L2Q8N4X5 818 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 TEX9Q8N6V9 391 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 CCNYL1Q8N7R7 359 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 INTS7Q9NVH2 962 aaKnown RBP6.62□□□□□ -1.35
USP16-203ENST00000399975 SEMA5BQ9P283 1151 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 KLHL14Q9P2G3 628 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 EPHA6Q9UF33 1036 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 ZNF225Q9UK10 706 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 DOLKQ9UPQ8 538 aa6.62□□□□□ -1.35
USP16-203ENST00000399975 LY6G6EA0A0G2JKS1 128 aa6.61□□□□□ -1.35
USP16-203ENST00000399975 CCNT2O60583 730 aaKnown RBP6.61□□□□□ -1.35
USP16-203ENST00000399975 CFIP05156 583 aa6.61□□□□□ -1.35
USP16-203ENST00000399975 UROSP10746 265 aa6.61□□□□□ -1.35
USP16-203ENST00000399975 JUPP14923 745 aa6.61□□□□□ -1.35
USP16-203ENST00000399975 GLB1P16278 677 aa6.61□□□□□ -1.35
USP16-203ENST00000399975 ENGP17813 658 aa6.61□□□□□ -1.35
USP16-203ENST00000399975 PEBP1P30086 187 aaKnown RBP6.61□□□□□ -1.35
USP16-203ENST00000399975 SERPINB1P30740 379 aa6.61□□□□□ -1.35
USP16-203ENST00000399975 HNF4AP41235 474 aa6.61□□□□□ -1.35
USP16-203ENST00000399975 SH3BP2P78314 561 aa6.61□□□□□ -1.35
USP16-203ENST00000399975 HHEXQ03014 270 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms