RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 ANKRD17O75179 2603 aaKnown RBP12.87□□□□□ -0.35
VCX3A-202ENST00000398729 HIVEP3Q5T1R4 2406 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 PRICKLE3O43900 615 aaPredicted RBP12.87□□□□□ -0.35
VCX3A-202ENST00000398729 ATXN8OSP0DMR3 200 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 TCP1P17987 556 aaKnown RBP12.87□□□□□ -0.35
VCX3A-202ENST00000398729 ALAS2P22557 587 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 GRIA3P42263 894 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 PGDP52209 483 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 ARSFP54793 590 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 RRADP55042 308 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 CTBP1Q13363 440 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 ESPL1Q14674 2120 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 NAA25Q14CX7 972 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 KLHL38Q2WGJ6 581 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 NKAIN1Q4KMZ8 207 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 TCTE1Q5JU00 501 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 FCRL6Q6DN72 434 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 MED25Q71SY5 747 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 DENND6AQ8IWF6 608 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 TMEM102Q8N9M5 508 aaPredicted RBP12.87□□□□□ -0.35
VCX3A-202ENST00000398729 OR9A1PQ8NGU1 263 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 ANP32BQ92688 251 aaKnown RBP12.87□□□□□ -0.35
VCX3A-202ENST00000398729 SIGLEC10Q96LC7 697 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 IP6K3Q96PC2 410 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 FBXO6Q9NRD1 293 aaPredicted RBP12.87□□□□□ -0.35
VCX3A-202ENST00000398729 FAM114A2Q9NRY5 505 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 C20orf96Q9NUD7 363 aaPredicted RBP12.87□□□□□ -0.35
VCX3A-202ENST00000398729 GALPQ9UBC7 116 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 PLEKHB1Q9UF11 243 aaPredicted RBP12.87□□□□□ -0.35
VCX3A-202ENST00000398729 ASIC3Q9UHC3 531 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 G3BP2Q9UN86 482 aaKnown RBP12.87□□□□□ -0.35
VCX3A-202ENST00000398729 PCDHGA9Q9Y5G4 932 aaKnown RBP12.87□□□□□ -0.35
VCX3A-202ENST00000398729 SEC16AO15027 2179 aa12.87□□□□□ -0.35
VCX3A-202ENST00000398729 DOPEY1Q5JWR5 2465 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 FER1L5A0AVI2 2057 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 KRT87PA6NCN2 255 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 ARHGEF33A8MVX0 844 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 PSIP1O75475 530 aaKnown RBP12.86□□□□□ -0.35
VCX3A-202ENST00000398729 KLF7O75840 302 aaPredicted RBP12.86□□□□□ -0.35
VCX3A-202ENST00000398729 CATP04040 527 aaKnown RBP12.86□□□□□ -0.35
VCX3A-202ENST00000398729 PSMB5P28074 263 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 OTX2P32243 289 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 FOLR3P41439 243 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 UQCRFS1P47985 274 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 CLCN7P51798 805 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 SSPNQ14714 243 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 GRM7Q14831 915 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 SLC9A5Q14940 896 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 CYP2A13Q16696 494 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 RNASEH2BQ5TBB1 312 aaKnown RBP12.86□□□□□ -0.35
VCX3A-202ENST00000398729 YOD1Q5VVQ6 348 aaPredicted RBP12.86□□□□□ -0.35
VCX3A-202ENST00000398729 NEK10Q6ZWH5 1172 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 PCGF5Q86SE9 256 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 AGGF1Q8N302 714 aaeCLIP12.86□□□□□ -0.35
VCX3A-202ENST00000398729 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.86□□□□□ -0.35
VCX3A-202ENST00000398729 OR2L3Q8NG85 312 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 OR2A1Q8NGT9 310 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 GABPB2Q8TAK5 448 aaPredicted RBP12.86□□□□□ -0.35
VCX3A-202ENST00000398729 KCNJ9Q92806 393 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 MIPEPQ99797 713 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 SELENOSQ9BQE4 189 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 FAM167BQ9BTA0 163 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 DDX47Q9H0S4 455 aaKnown RBP12.86□□□□□ -0.35
VCX3A-202ENST00000398729 KLHL42Q9P2K6 505 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 FBXO5Q9UKT4 447 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 PTRH2Q9Y3E5 179 aaKnown RBP12.86□□□□□ -0.35
VCX3A-202ENST00000398729 KLK4Q9Y5K2 254 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 COMMD10Q9Y6G5 202 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 FAM169AQ9Y6X4 670 aa12.86□□□□□ -0.35
VCX3A-202ENST00000398729 A0A1B0GX78 115 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 A0A1W2PPV9 198 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 ZNF839A8K0R7 811 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 MYO1CO00159 1063 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 SRPX2O60687 465 aaPredicted RBP12.85□□□□□ -0.35
VCX3A-202ENST00000398729 PDGFAP04085 211 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 ERGP11308 486 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 PIM1P11309 404 aaPredicted RBP12.85□□□□□ -0.35
VCX3A-202ENST00000398729 PGAM1P18669 254 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 CMPK1P30085 196 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 HSD17B2P37059 387 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 SLC1A2P43004 574 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 ATP1A4Q13733 1029 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 FASTKQ14296 549 aaKnown RBP12.85□□□□□ -0.35
VCX3A-202ENST00000398729 ARHGAP19Q14CB8 494 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 FAM214AQ32MH5 1076 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.85□□□□□ -0.35
VCX3A-202ENST00000398729 ZNF549Q6P9A3 640 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 TTLL10Q6ZVT0 673 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 TTC29Q8NA56 475 aaPredicted RBP12.85□□□□□ -0.35
VCX3A-202ENST00000398729 OR2Y1Q8NGV0 311 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 SMPDL3AQ92484 453 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 SLCO2A1Q92959 643 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 PTERQ96BW5 349 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 MLXIPLQ9NP71 852 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 CUTCQ9NTM9 273 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 PCYOX1Q9UHG3 505 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 DHRS7Q9Y394 339 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 ZNF451Q9Y4E5 1061 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 PCDHGB7Q9Y5F8 929 aa12.85□□□□□ -0.35
VCX3A-202ENST00000398729 MED13Q9UHV7 2174 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms