RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 RAB42Q8N4Z0 105 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 EXD3Q8N9H8 876 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 FBXO25Q8TCJ0 367 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 ZNF480Q8WV37 535 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 EXTL1Q92935 676 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 ZUFSPQ96AP4 578 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 OLFM1Q99784 485 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 SEMA4CQ9C0C4 833 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 RAB17Q9H0T7 212 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 ACTR5Q9H9F9 607 aaPredicted RBP16.05■□□□□ 0.16
APTR-201ENST00000398043 EURLQ9NYK6 297 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 TRMT6Q9UJA5 497 aaKnown RBP16.05■□□□□ 0.16
APTR-201ENST00000398043 KCND3Q9UK17 655 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 ADAMTS6Q9UKP5 1117 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 PCSK5Q92824 1860 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 E7ENX8 843 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 E7EQ34 232 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 NRP2O60462 931 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 CTSVO60911 334 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 OR2B3O76000 313 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 FURINP09958 794 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 CYP2A7P20853 494 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 SSTR1P30872 391 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 HSD17B2P37059 387 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 PNLIPRP1P54315 467 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 GPX6P59796 221 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 CAV1Q03135 178 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 TAP2Q03519 686 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 LRRC8EQ6NSJ5 796 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 FAM45BPQ6NSW5 357 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 SUSD1Q6UWL2 747 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 TMEM207Q6UWW9 146 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 SLC26A11Q86WA9 606 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 MCATQ8IVS2 390 aaKnown RBP16.04■□□□□ 0.16
APTR-201ENST00000398043 FAM45AQ8TCE6 357 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 PYROXD1Q8WU10 500 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 SMPDL3AQ92484 453 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 MIPEPQ99797 713 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 LRRC1Q9BTT6 524 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 GPR87Q9BY21 358 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 FAM117AQ9C073 453 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 CHST8Q9H2A9 424 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 SLC6A20Q9NP91 592 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 SAYSD1Q9NPB0 183 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 ZFATQ9P243 1243 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 VWA7Q9Y334 891 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 DOCK10Q96BY6 2186 aa16.04■□□□□ 0.16
APTR-201ENST00000398043 FASNP49327 2511 aaKnown RBP16.03■□□□□ 0.16
APTR-201ENST00000398043 SCN3AQ9NY46 2000 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 IGKV1-8A0A0C4DH67 115 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 OR2A25A4D2G3 310 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 CXorf49A8MYA2 514 aaPredicted RBP16.03■□□□□ 0.16
APTR-201ENST00000398043 ZBTB14O43829 449 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 CREG1O75629 220 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 PIAS1O75925 651 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 PRB1P04280 392 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 PTPN4P29074 926 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 IMPA1P29218 277 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 PLTPP55058 493 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 SLC7A5Q01650 507 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 GUCY2DQ02846 1103 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 LY6DQ14210 128 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 ATP1A1-AS1Q5TC04 95 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 RHBDD2Q6NTF9 364 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 TLDC1Q6P9B6 456 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 FAM198BQ6UWH4 519 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 UBE2R2Q712K3 238 aaPredicted RBP16.03■□□□□ 0.16
APTR-201ENST00000398043 SYTL1Q8IYJ3 562 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 GPR135Q8IZ08 494 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 MMGT1Q8N4V1 131 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 GPATCH11Q8N954 259 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 MR1Q95460 341 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 CLIP3Q96DZ5 547 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 PDLIM5Q96HC4 596 aaKnown RBP16.03■□□□□ 0.16
APTR-201ENST00000398043 ZDHHC18Q9NUE0 388 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 INTS7Q9NVH2 962 aaKnown RBP16.03■□□□□ 0.16
APTR-201ENST00000398043 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.03■□□□□ 0.16
APTR-201ENST00000398043 PDE10AQ9Y233 779 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 AP1M2Q9Y6Q5 423 aa16.03■□□□□ 0.16
APTR-201ENST00000398043 TNRC6AQ8NDV7 1962 aaKnown RBP16.02■□□□□ 0.16
APTR-201ENST00000398043 TCRBV9S1A1TA0A576 114 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 SLC16A5O15375 505 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 ZSCAN9O15535 394 aaPredicted RBP16.02■□□□□ 0.16
APTR-201ENST00000398043 TUBB4AP04350 444 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 KLK3P07288 261 aaPredicted RBP16.02■□□□□ 0.16
APTR-201ENST00000398043 C8GP07360 202 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 HBQ1P09105 142 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 RAB40ALP0C0E4 278 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 PRKAR1AP10644 381 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 RGS4P49798 205 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 MC1RQ01726 317 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 SP140Q13342 867 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 PHKG1Q16816 387 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 ZXDCQ2QGD7 858 aaPredicted RBP16.02■□□□□ 0.16
APTR-201ENST00000398043 PTCHD3Q3KNS1 767 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 TAF1BQ53T94 588 aaPredicted RBP16.02■□□□□ 0.16
APTR-201ENST00000398043 ZNF425Q6IV72 752 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 FBXO42Q6P3S6 717 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 RNF44Q7L0R7 432 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 STRA8Q7Z7C7 330 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms