RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 NOBOXO60393 691 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 ANXA2P07355 339 aaKnown RBP11.09□□□□□ -0.63
TTC28-201ENST00000397906 HSD17B2P37059 387 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 ETV3P41162 512 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 CEBPGP53567 150 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 C11orf24Q96F05 449 aaPredicted RBP11.09□□□□□ -0.63
TTC28-201ENST00000397906 SALL4Q9UJQ4 1053 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 RUVBL1Q9Y265 456 aaKnown RBP11.09□□□□□ -0.63
TTC28-201ENST00000397906 ANKRD66B4E2M5 251 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 SLC7A4O43246 635 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 ECI2O75521 394 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 DRD4P21917 467 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 PTPRCAPQ14761 206 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 UPP1Q16831 310 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 GPAT4Q86UL3 456 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 MMABQ96EY8 250 aaPredicted RBP11.09□□□□□ -0.63
TTC28-201ENST00000397906 KCNH6Q9H252 994 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 DZANK1Q9NVP4 752 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 ADGRD1Q6QNK2 874 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 CENPMQ9NSP4 180 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 HRASLS2Q9NWW9 162 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 ZNF860A6NHJ4 632 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 CXCR6O00574 342 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 CBLP22681 906 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 CRISP3P54108 245 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 PNLIPRP1P54315 467 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 MEF2AQ02078 507 aaPredicted RBP11.09□□□□□ -0.63
TTC28-201ENST00000397906 ATG14Q6ZNE5 492 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 B3GNT4Q9C0J1 378 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 ZCCHC3Q9NUD5 404 aaKnown RBP11.09□□□□□ -0.63
TTC28-201ENST00000397906 IQCF3P0C7M6 154 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 PDE12Q6L8Q7 609 aaKnown RBP11.09□□□□□ -0.63
TTC28-201ENST00000397906 TSACCQ96A04 125 aaPredicted RBP11.09□□□□□ -0.63
TTC28-201ENST00000397906 XKR8Q9H6D3 395 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 SPHK2Q9NRA0 654 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 TGFBR2P37173 567 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 STARP49675 285 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 SLC9B1Q4ZJI4 515 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 CAND1Q86VP6 1230 aaKnown RBP11.09□□□□□ -0.63
TTC28-201ENST00000397906 C1orf52Q8N6N3 182 aaKnown RBP11.09□□□□□ -0.63
TTC28-201ENST00000397906 EIF1ADQ8N9N8 165 aaKnown RBP11.09□□□□□ -0.63
TTC28-201ENST00000397906 KDELR3O43731 214 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 PLIN3O60664 434 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 NDUFA5Q16718 116 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 CRTC1Q6UUV9 634 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 EZH1Q92800 747 aaPredicted RBP11.09□□□□□ -0.63
TTC28-201ENST00000397906 OR8D2Q9GZM6 311 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 HEPACAM2A8MVW5 462 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 H3BQ06 376 aaPredicted RBP11.09□□□□□ -0.63
TTC28-201ENST00000397906 KMOO15229 486 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 ODF4Q2M2E3 257 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 GPATCH1Q9BRR8 931 aaKnown RBP11.09□□□□□ -0.63
TTC28-201ENST00000397906 IGSF9Q9P2J2 1179 aa11.09□□□□□ -0.63
TTC28-201ENST00000397906 PRPF19Q9UMS4 504 aaKnown RBP11.09□□□□□ -0.63
TTC28-201ENST00000397906 BTN3A3O00478 584 aa11.08□□□□□ -0.63
TTC28-201ENST00000397906 PRKAR1AP10644 381 aa11.08□□□□□ -0.63
TTC28-201ENST00000397906 ACADLP28330 430 aa11.08□□□□□ -0.63
TTC28-201ENST00000397906 IDH3AP50213 366 aa11.08□□□□□ -0.63
TTC28-201ENST00000397906 ZNF41P51814 821 aaPredicted RBP11.08□□□□□ -0.63
TTC28-201ENST00000397906 ZNF627Q7L945 461 aa11.08□□□□□ -0.63
TTC28-201ENST00000397906 SFRP1Q8N474 314 aa11.08□□□□□ -0.63
TTC28-201ENST00000397906 CRELD1Q96HD1 420 aa11.08□□□□□ -0.63
TTC28-201ENST00000397906 CRTAC1Q9NQ79 661 aa11.08□□□□□ -0.63
TTC28-201ENST00000397906 NALCNQ8IZF0 1738 aa11.08□□□□□ -0.63
TTC28-201ENST00000397906 A0A1W2PQ72 361 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 IRGMA1A4Y4 181 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 CNTN5O94779 1100 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 GALTP07902 379 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 GPR17Q13304 367 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 OXR1Q8N573 874 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 ZNF599Q96NL3 588 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 TVP23BQ9NYZ1 205 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 QPCTQ16769 361 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 APLFQ8IW19 511 aaPredicted RBP11.08□□□□□ -0.64
TTC28-201ENST00000397906 OMA1Q96E52 524 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 PNPLA3Q9NST1 481 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 TTC34A8MYJ7 566 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 GABRDO14764 452 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 GRID2O43424 1007 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 SNX4O95219 450 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 PRPS2P11908 318 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 CCT3P49368 545 aaKnown RBP11.08□□□□□ -0.64
TTC28-201ENST00000397906 HERVK_113P63132 956 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 GIPC3Q8TF64 312 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 SLC13A3Q8WWT9 602 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 SH3YL1Q96HL8 342 aaPredicted RBP11.08□□□□□ -0.64
TTC28-201ENST00000397906 C8orf48Q96LL4 319 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 ERVK-6Q9BXR3 956 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 CLK4Q9HAZ1 481 aaKnown RBP11.08□□□□□ -0.64
TTC28-201ENST00000397906 ZNF358Q9NW07 568 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 SNED1Q8TER0 1413 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 NPIPA5E9PKD4 350 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 ADAMDEC1O15204 470 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 OPN1SWP03999 348 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 ZNF20P17024 532 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 IL18R1Q13478 541 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 ARL10Q8N8L6 244 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 WDR77Q9BQA1 342 aaPredicted RBP11.08□□□□□ -0.64
TTC28-201ENST00000397906 NPIPA1Q9UND3 350 aa11.08□□□□□ -0.64
TTC28-201ENST00000397906 TRIM64A6NGJ6 449 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms