RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 DTX1Q86Y01 620 aa24.42■■□□□ 1.5
TSPAN4-207ENST00000397411 GPR135Q8IZ08 494 aa24.42■■□□□ 1.5
TSPAN4-207ENST00000397411 OR2A1Q8NGT9 310 aa24.42■■□□□ 1.5
TSPAN4-207ENST00000397411 NKD1Q969G9 470 aa24.42■■□□□ 1.5
TSPAN4-207ENST00000397411 MRPS30Q9NP92 439 aaKnown RBP24.42■■□□□ 1.5
TSPAN4-207ENST00000397411 PLCL2Q9UPR0 1127 aa24.42■■□□□ 1.5
TSPAN4-207ENST00000397411 TMEM184BQ9Y519 407 aaPredicted RBP24.42■■□□□ 1.5
TSPAN4-207ENST00000397411 A0A1W2PPV9 198 aa24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 E7ENX8 843 aa24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 MT-ND3P03897 115 aa24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 NTRK1P04629 796 aa24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 CCDC166P0CW27 439 aa24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 PMS2P54278 862 aa24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 UCNP55089 124 aa24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 ITGA1P56199 1179 aa24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 RAB10P61026 200 aa24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 TAP2Q03519 686 aa24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 TLE3Q04726 772 aa24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 ZC3H12BQ5HYM0 836 aaKnown RBP24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 FRA10AC1Q70Z53 315 aa24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 TRMT10CQ7L0Y3 403 aaKnown RBP24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 ESX1Q8N693 406 aa24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 GALNT6Q8NCL4 622 aa24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 OR2L3Q8NG85 312 aa24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 ANKRD7Q92527 254 aa24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 MED8Q96G25 268 aa24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 CCNL2Q96S94 520 aaPredicted RBP24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 CHRNA10Q9GZZ6 450 aa24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 UTP6Q9NYH9 597 aaKnown RBP24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 STOX2Q9P2F5 926 aaPredicted RBP24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 TAC3Q9UHF0 121 aa24.41■■□□□ 1.5
TSPAN4-207ENST00000397411 AHCTF1Q8WYP5 2266 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 NPEPPSL1A6NEC2 478 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 TARM1B6A8C7 271 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 POC1B-GALNT4F8VUJ3 575 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 GUCA1CO95843 209 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 INHBAP08476 426 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 ENO2P09104 434 aaPredicted RBP24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 IMPA1P29218 277 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 CRABP2P29373 138 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 GRIA3P42263 894 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 AP1S2P56377 157 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 TMPRSS3P57727 454 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 PHKG1Q16816 387 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 DEFB110Q30KQ9 67 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 MROH9Q5TGP6 573 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 AGTRAPQ6RW13 159 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 CCDC81Q6ZN84 652 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 OR1L3Q8NH93 324 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 ANKRD49Q8WVL7 239 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 ATL1Q8WXF7 558 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 KIAA1143Q96AT1 154 aaPredicted RBP24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 CLIP3Q96DZ5 547 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 ATG10Q9H0Y0 220 aa24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 CCDC177Q9NQR7 707 aaPredicted RBP24.4■■□□□ 1.5
TSPAN4-207ENST00000397411 E7EQ34 232 aa24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 CDC7O00311 574 aa24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 OR2B3O76000 313 aa24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 SLU7O95391 586 aaKnown RBP24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 TIAF1O95411 115 aa24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 MSL3P1P0C860 447 aa24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 MSH2P43246 934 aa24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 UBAP2Q5T6F2 1119 aaKnown RBP24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 FCRL6Q6DN72 434 aa24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 MBOAT1Q6ZNC8 495 aa24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 TAOK1Q7L7X3 1001 aa24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 TIPARPQ7Z3E1 657 aaKnown RBP24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 VASH2Q86V25 355 aa24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 MCATQ8IVS2 390 aaKnown RBP24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 DNAJC22Q8N4W6 341 aa24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 DPH7Q9BTV6 452 aa24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 SPRY4Q9C004 299 aa24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 DERL2Q9GZP9 239 aa24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 PCBD2Q9H0N5 130 aa24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 PADI1Q9ULC6 663 aa24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 NOVA2Q9UNW9 492 aaKnown RBP24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 ANKRD11Q6UB99 2663 aaPredicted RBP24.39■■□□□ 1.49
TSPAN4-207ENST00000397411 TEX51A0A1B0GUA7 166 aa24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 CPNE3O75131 537 aaKnown RBP24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 DLGAP3O95886 979 aa24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 FAM153BP0C7A2 387 aa24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 ABATP80404 500 aa24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 PRDX1Q06830 199 aaKnown RBP24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 NAE1Q13564 534 aa24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 MAP7Q14244 749 aa24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 COL28A1Q2UY09 1125 aa24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 FAM153CQ494X1 144 aa24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 ICE2Q659A1 982 aa24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 ADCK2Q7Z695 626 aa24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 ADAMTSL2Q86TH1 951 aa24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 TBC1D1Q86TI0 1168 aaPredicted RBP24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 SPATA6LQ8N4H0 392 aa24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 EIF1ADQ8N9N8 165 aaKnown RBP24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 EGFL8Q99944 293 aa24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 FUT8Q9BYC5 575 aa24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 UNKQ9C0B0 810 aaKnown RBP24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 EURLQ9NYK6 297 aa24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 TLK1Q9UKI8 766 aa24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 SNX7Q9UNH6 387 aa24.38■■□□□ 1.49
TSPAN4-207ENST00000397411 SPTBP11277 2137 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms