RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 FANCEQ9HB96 536 aa20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 FAM60AQ9NP50 221 aa20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 ABCF3Q9NUQ8 709 aa20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 INTS7Q9NVH2 962 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 ARL15Q9NXU5 204 aa20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 UTP6Q9NYH9 597 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 CTNNAL1Q9UBT7 734 aa20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 TAC3Q9UHF0 121 aa20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 EXOC1LA0A1B0GW35 172 aa20.4■□□□□ 0.86
TSPAN4-206ENST00000397408 HMX2A2RU54 273 aa20.4■□□□□ 0.86
TSPAN4-206ENST00000397408 FKBP9O95302 570 aa20.4■□□□□ 0.86
TSPAN4-206ENST00000397408 ENO2P09104 434 aaPredicted RBP20.4■□□□□ 0.86
TSPAN4-206ENST00000397408 LIPCP11150 499 aa20.4■□□□□ 0.86
TSPAN4-206ENST00000397408 GMPRP36959 345 aa20.4■□□□□ 0.86
TSPAN4-206ENST00000397408 AP1S2P56377 157 aa20.4■□□□□ 0.86
TSPAN4-206ENST00000397408 TBPL1P62380 186 aa20.4■□□□□ 0.86
TSPAN4-206ENST00000397408 VSNL1P62760 191 aa20.4■□□□□ 0.86
TSPAN4-206ENST00000397408 TSNQ15631 228 aaKnown RBP20.4■□□□□ 0.86
TSPAN4-206ENST00000397408 PPP1R3AQ16821 1122 aa20.4■□□□□ 0.86
TSPAN4-206ENST00000397408 DEFB110Q30KQ9 67 aa20.4■□□□□ 0.86
TSPAN4-206ENST00000397408 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.4■□□□□ 0.86
TSPAN4-206ENST00000397408 LRRC56Q8IYG6 542 aaPredicted RBP20.4■□□□□ 0.86
TSPAN4-206ENST00000397408 ZNF501Q96CX3 271 aaPredicted RBP20.4■□□□□ 0.86
TSPAN4-206ENST00000397408 ULBP3Q9BZM4 244 aa20.4■□□□□ 0.86
TSPAN4-206ENST00000397408 NOVA2Q9UNW9 492 aaKnown RBP20.4■□□□□ 0.86
TSPAN4-206ENST00000397408 ZZEF1O43149 2961 aa20.39■□□□□ 0.86
TSPAN4-206ENST00000397408 TMEM150CB9EJG8 249 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 STK17BO94768 372 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 TIAF1O95411 115 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 GUCA1CO95843 209 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 SLC35E2BP0CK96 405 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 CRABP2P29373 138 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 CMPK1P30085 196 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 MSH2P43246 934 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 CSHL1Q14406 222 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 TGIF1Q15583 401 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 THEMIS2Q5TEJ8 643 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 AGTRAPQ6RW13 159 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 LRRC69Q6ZNQ3 347 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 TAOK1Q7L7X3 1001 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 ADAMTSL2Q86TH1 951 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 BPHLQ86WA6 291 aaPredicted RBP20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.39■□□□□ 0.856e-6■■□□□ 13.5
TSPAN4-206ENST00000397408 N4BP2L2Q92802 583 aaPredicted RBP20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 MED8Q96G25 268 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 CHRNA10Q9GZZ6 450 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 ATG10Q9H0Y0 220 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 EPB41L4BQ9H329 900 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 CCDC177Q9NQR7 707 aaPredicted RBP20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 WDR70Q9NW82 654 aa20.39■□□□□ 0.85
TSPAN4-206ENST00000397408 SPTBP11277 2137 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 A0A087WV48 116 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 KLK10O43240 276 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 MSL3P1P0C860 447 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 ZNF28P17035 718 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 GRIA3P42263 894 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 SERPINB8P50452 374 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 SERPINB9P50453 376 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 YBX1P67809 324 aaKnown RBP20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 CLN3Q13286 438 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 FCRL6Q6DN72 434 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 PWWP2BQ6NUJ5 590 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 FIGLAQ6QHK4 219 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 FRA10AC1Q70Z53 315 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 OR8K5Q8NH50 307 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 DCAKDQ8WVC6 231 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 UBXN10Q96LJ8 280 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 SLC6A20Q9NP91 592 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 SNX15Q9NRS6 342 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 OARD1Q9Y530 152 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 PKD1L2Q7Z442 2459 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 PCM1Q15154 2024 aa20.38■□□□□ 0.85
TSPAN4-206ENST00000397408 HCRTR1O43613 425 aa20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 KIAA0754O94854 1291 aa20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 CCNDBP1O95273 360 aa20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 CD1DP15813 335 aa20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 ATP6V0D1P61421 351 aa20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 NAE1Q13564 534 aa20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 SLC29A2Q14542 456 aa20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 ICE2Q659A1 982 aa20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 TBC1D1Q86TI0 1168 aaPredicted RBP20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 DTX1Q86Y01 620 aa20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 SPACA3Q8IXA5 215 aa20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 DNAJC22Q8N4W6 341 aa20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 OR1L3Q8NH93 324 aa20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 ALKBH8Q96BT7 664 aaKnown RBP20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 FBXL8Q96CD0 374 aa20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 DPH1Q9BZG8 443 aa20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 MRPS30Q9NP92 439 aaKnown RBP20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 ZNF180Q9UJW8 692 aa20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 PILRAQ9UKJ1 303 aa20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 TMEM184BQ9Y519 407 aaPredicted RBP20.37■□□□□ 0.85
TSPAN4-206ENST00000397408 RAD1O60671 282 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 DLGAP3O95886 979 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 ALDOAP04075 364 aaKnown RBP20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 GABRA4P48169 554 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 NAA25Q14CX7 972 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 TAF1BQ53T94 588 aaPredicted RBP20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 PRAMEF13Q5VWM6 474 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms