RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 ZXDCQ2QGD7 858 aaPredicted RBP18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 C18orf21Q32NC0 220 aaPredicted RBP18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 PRRT3Q5FWE3 981 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 FBXO48Q5FWF7 155 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 OGFOD2Q6N063 350 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 TSSK4Q6SA08 328 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 CCDC121Q6ZUS5 278 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 TRIM46Q7Z4K8 759 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 C17orf64Q86WR6 236 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 SYT12Q8IV01 421 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 SFRP1Q8N474 314 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 DEFB119Q8N690 84 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 CDYL2Q8N8U2 506 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 SLC5A11Q8WWX8 675 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 USP7Q93009 1102 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 SH3KBP1Q96B97 665 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 PYCR2Q96C36 320 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 LRRC61Q9BV99 259 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 PELI2Q9HAT8 420 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 PNMA8BQ9ULN7 279 aaPredicted RBP18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 PPT2Q9UMR5 302 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 ENTPD2Q9Y5L3 495 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 ZDBF2Q9HCK1 2354 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 OR52A4PA6NMU1 304 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 LMO7DNF2Z398 122 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 PPP6CO00743 305 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 SDHDO14521 159 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 RGS14O43566 566 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 EPORP19235 508 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 ITPKAP23677 461 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 MAOBP27338 520 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 DHPSP49366 369 aaPredicted RBP18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 ATP4BP51164 291 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 PHEXP78562 749 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 GRIK2Q13002 908 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 KRT72Q14CN4 511 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 SLC9B1Q4ZJI4 515 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 XKR7Q5GH72 579 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 XKR6Q5GH73 641 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 THEMIS2Q5TEJ8 643 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 CLEC6AQ6EIG7 209 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 IL27RAQ6UWB1 636 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 MTDHQ86UE4 582 aaKnown RBP18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 DDIASQ8IXT1 998 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 FAM9CQ8IZT9 166 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 KRT78Q8N1N4 520 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 ZBTB44Q8NCP5 570 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 OR52E1Q8NGJ3 308 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 EBF4Q9BQW3 602 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 MYLK2Q9H1R3 596 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 ELOVL6Q9H5J4 265 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 SLC40A1Q9NP59 571 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 ACSS2Q9NR19 701 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 NMRK1Q9NWW6 199 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 PILRBQ9UKJ0 227 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 DOLKQ9UPQ8 538 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 CFAP20Q9Y6A4 193 aaKnown RBP18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 THADAQ6YHU6 1953 aa18.4■□□□□ 0.54
TSPAN4-204ENST00000397404 TMEM233B4DJY2 109 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 AQP9O43315 295 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 EPHA3P29320 983 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 PRDX3P30048 256 aaKnown RBP18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 AVPR2P30518 371 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 FASLGP48023 281 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 RASSF2P50749 326 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 UBE2IP63279 158 aaKnown RBP18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 CSTF3Q12996 717 aaKnown RBP18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 PRKG2Q13237 762 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 TUBB3Q13509 450 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 KIR2DS3Q14952 304 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 LSM12Q3MHD2 195 aaKnown RBP18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 KLHL35Q6PF15 583 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 LARP4Q71RC2 724 aaKnown RBP eCLIP18.39■□□□□ 0.548e-7■■■■■ 32.5
TSPAN4-204ENST00000397404 CEP68Q76N32 757 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 SPATA19Q7Z5L4 167 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 CLNKQ7Z7G1 428 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 AMIGO1Q86WK6 493 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 TBC1D19Q8N5T2 526 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 FITM2Q8N6M3 262 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 ABHD11Q8NFV4 315 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 MAPK15Q8TD08 544 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 LCN9Q8WX39 176 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 PPP3R2Q96LZ3 170 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 BRF2Q9HAW0 419 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 CPNE7Q9UBL6 633 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 KLF15Q9UIH9 416 aa18.39■□□□□ 0.54
TSPAN4-204ENST00000397404 ABCA7Q8IZY2 2146 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 PIP5K1BO14986 540 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 SKAP2O75563 359 aaPredicted RBP18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 C1GALT1C1LP0DN25 315 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 ACPPP15309 386 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 LBPP18428 481 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 PRPH2P23942 346 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 SLC19A1P41440 591 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 CTSKP43235 329 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 MRPL19P49406 292 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 MNAT1P51948 309 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 GSTA3Q16772 222 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 ATP6AP1LQ52LC2 224 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms