RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 GPRIN3Q6ZVF9 776 aa22.79■■□□□ 1.24
TSPAN4-202ENST00000397396 EFL1Q7Z2Z2 1120 aaKnown RBP22.79■■□□□ 1.24
TSPAN4-202ENST00000397396 OOSP2Q86WS3 158 aa22.79■■□□□ 1.24
TSPAN4-202ENST00000397396 GATAD2AQ86YP4 633 aa22.79■■□□□ 1.24
TSPAN4-202ENST00000397396 LINC01555Q8NAE3 123 aa22.79■■□□□ 1.24
TSPAN4-202ENST00000397396 OR4E2Q8NGC2 313 aa22.79■■□□□ 1.24
TSPAN4-202ENST00000397396 AGAP11Q8TF27 550 aa22.79■■□□□ 1.24
TSPAN4-202ENST00000397396 SIKE1Q9BRV8 207 aa22.79■■□□□ 1.24
TSPAN4-202ENST00000397396 EPN3Q9H201 632 aa22.79■■□□□ 1.24
TSPAN4-202ENST00000397396 SMOC1Q9H4F8 434 aa22.79■■□□□ 1.24
TSPAN4-202ENST00000397396 XKR8Q9H6D3 395 aa22.79■■□□□ 1.24
TSPAN4-202ENST00000397396 MID1IP1Q9NPA3 183 aa22.79■■□□□ 1.24
TSPAN4-202ENST00000397396 SLCO1B3Q9NPD5 702 aa22.79■■□□□ 1.24
TSPAN4-202ENST00000397396 PRAMEF33A0A0G2JMD5 474 aa22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 LNP1A1A4G5 178 aa22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 CRCPO75575 148 aa22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 LYPLA1O75608 230 aaPredicted RBP22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 TGDSO95455 350 aa22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 ENO1P06733 434 aaKnown RBP22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 CHRM5P08912 532 aaPredicted RBP22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 TROVE2P10155 538 aaKnown RBP eCLIP22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 GLB1P16278 677 aa22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 GPR3P46089 330 aa22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 NR0B2Q15466 257 aa22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 CES4AQ5XG92 561 aa22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 C17orf64Q86WR6 236 aa22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 WDR75Q8IWA0 830 aaKnown RBP22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 SLC35F3Q8IY50 421 aa22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 LRRC34Q8IZ02 419 aa22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 LSMEM2Q8N112 164 aa22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 PIWIL2Q8TC59 973 aaKnown RBP22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 SORT1Q99523 831 aa22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 EHD1Q9H4M9 534 aa22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 ACTR8Q9H981 624 aa22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 TRPS1Q9UHF7 1281 aa22.78■■□□□ 1.24
TSPAN4-202ENST00000397396 PIPSLA2A3N6 862 aa22.77■■□□□ 1.24
TSPAN4-202ENST00000397396 PNLIPP16233 465 aa22.77■■□□□ 1.24
TSPAN4-202ENST00000397396 HRH2P25021 359 aa22.77■■□□□ 1.24
TSPAN4-202ENST00000397396 RPL14P50914 215 aaKnown RBP22.77■■□□□ 1.24
TSPAN4-202ENST00000397396 SLC14A1Q13336 389 aa22.77■■□□□ 1.24
TSPAN4-202ENST00000397396 GGTA1PQ4G0N0 100 aa22.77■■□□□ 1.24
TSPAN4-202ENST00000397396 TCEAL6Q6IPX3 200 aa22.77■■□□□ 1.24
TSPAN4-202ENST00000397396 ARMC6Q6NXE6 501 aa22.77■■□□□ 1.24
TSPAN4-202ENST00000397396 SUSD1Q6UWL2 747 aa22.77■■□□□ 1.24
TSPAN4-202ENST00000397396 RPS27LQ71UM5 84 aaKnown RBP22.77■■□□□ 1.24
TSPAN4-202ENST00000397396 ZNF438Q7Z4V0 828 aa22.77■■□□□ 1.24
TSPAN4-202ENST00000397396 MILR1Q7Z6M3 343 aa22.77■■□□□ 1.24
TSPAN4-202ENST00000397396 SLC5A11Q8WWX8 675 aa22.77■■□□□ 1.24
TSPAN4-202ENST00000397396 NAT6Q93015 286 aa22.77■■□□□ 1.24
TSPAN4-202ENST00000397396 TCEAL3Q969E4 200 aa22.77■■□□□ 1.24
TSPAN4-202ENST00000397396 FGFR1OP2Q9NVK5 253 aa22.77■■□□□ 1.24
TSPAN4-202ENST00000397396 PSD3Q9NYI0 1048 aa22.77■■□□□ 1.24
TSPAN4-202ENST00000397396 TAC3Q9UHF0 121 aa22.77■■□□□ 1.24
TSPAN4-202ENST00000397396 PADI4Q9UM07 663 aa22.77■■□□□ 1.24
TSPAN4-202ENST00000397396 A0A1W2PPV9 198 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 C2orf74A8MZ97 194 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 OR7A17O14581 309 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 PPM1DO15297 605 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 FLRT2O43155 660 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 CLDN9O95484 217 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 CHEK2O96017 543 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 FGF4P08620 206 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 NPPBP16860 134 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 ARRB2P32121 409 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 GRK6P43250 576 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 DUSP3P51452 185 aaPredicted RBP22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 IRF8Q02556 426 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 TRAF3Q13114 568 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 NR1D2Q14995 579 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 TBCCQ15814 346 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 CSRP2Q16527 193 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 SH2D4BQ5SQS7 431 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 LIPJQ5W064 366 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 CPLX4Q7Z7G2 160 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 SFTPA2Q8IWL1 248 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 ADGRF3Q8IZF5 1079 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 CLYBLQ8N0X4 340 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 MOCOSQ96EN8 888 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 OR4K3Q96R72 315 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 EFCAB11Q9BUY7 163 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 TRIM55Q9BYV6 548 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 SLC29A3Q9BZD2 475 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 C20orf27Q9GZN8 174 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 TWSG1Q9GZX9 223 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 PELI2Q9HAT8 420 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 PFDN4Q9NQP4 134 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 ACSS2Q9NR19 701 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 ABCF3Q9NUQ8 709 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 LRIT1Q9P2V4 623 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 VTI1BQ9UEU0 232 aa22.76■■□□□ 1.23
TSPAN4-202ENST00000397396 OR6C74A6NCV1 312 aa22.75■■□□□ 1.23
TSPAN4-202ENST00000397396 ISM1B1AKI9 464 aa22.75■■□□□ 1.23
TSPAN4-202ENST00000397396 UBXN7O94888 489 aa22.75■■□□□ 1.23
TSPAN4-202ENST00000397396 TSPAN8P19075 237 aa22.75■■□□□ 1.23
TSPAN4-202ENST00000397396 CMPK1P30085 196 aa22.75■■□□□ 1.23
TSPAN4-202ENST00000397396 HNF4AP41235 474 aa22.75■■□□□ 1.23
TSPAN4-202ENST00000397396 SH3BP2P78314 561 aa22.75■■□□□ 1.23
TSPAN4-202ENST00000397396 PRDX1Q06830 199 aaKnown RBP22.75■■□□□ 1.23
TSPAN4-202ENST00000397396 LAPTM5Q13571 262 aa22.75■■□□□ 1.23
TSPAN4-202ENST00000397396 PAGE2BQ5JRK9 111 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms